SHOGoiN Cell Methylome: GSM2481538

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2481538


Profile download
7010000000000000000000-771Sequence Read ArchiveSRP074598SRP074598_M11Single-cell DNA methylome sequencing of human preimplantation embryosMethylome4-cell embryoHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000254303 novel transcript 3.4594 0.0000
2 ENSG00000233125 ACTBP12 ACTB pseudogene 12 3.3284 0.0000
3 ENSG00000205293 LINC01602 long intergenic non-protein coding RNA 1602 3.1699 0.0000
4 ENSG00000227862 HNRNPA1P31 heterogeneous nuclear ribonucleoprotein A1 pseudogene 31 3.1699 0.0000
5 ENSG00000234187 AIMP1P1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 pseudogene 1 3.1699 0.0000
7 ENSG00000267734 novel transcript, antisense to HS2ST1 3.1699 0.0000
9 ENSG00000162630 B3GALT2 beta-1,3-galactosyltransferase 2 3.0000 0.0000
10 ENSG00000162753 SLC9C2 solute carrier family 9 member C2 (putative) 3.0000 0.0000
63332 ENSG00000207045 RNU6-532P RNA, U6 small nuclear 532, pseudogene -2.4243 0.0000
63333 ENSG00000262434 novel transcript, antisense to RNMTL1 -2.4243 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000261821 novel transcript, antisense to CYP11A1 -2.4286 0.6272
63340 ENSG00000227882 THAP12P6 THAP domain containing 12 pseudogene 6 -2.4286 0.6272
63339 ENSG00000256779 serine/arginine-rich splicing factor 8 (SRSF8) pseudogene -2.4284 0.0000
63338 ENSG00000201370 NA -2.4270 0.0000
63337 ENSG00000214070 mannosidase, endo-alpha-like (MANEAL) pseudogene -2.4262 0.1687
63336 ENSG00000197651 CCER1 coiled-coil glutamate rich protein 1 -2.4260 0.0000
63335 ENSG00000129749 CHRNA10 cholinergic receptor nicotinic alpha 10 subunit -2.4256 0.0001
63334 ENSG00000100030 MAPK1 mitogen-activated protein kinase 1 -2.4253 0.0004
63333 ENSG00000262434 novel transcript, antisense to RNMTL1 -2.4243 0.0000
63332 ENSG00000207045 RNU6-532P RNA, U6 small nuclear 532, pseudogene -2.4243 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...