Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2481541

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2481541


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7010000000000000000000-771Sequence Read ArchiveSRP074598SRP074598_M14Single-cell DNA methylome sequencing of human preimplantation embryosMethylome4-cell embryoHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000239473 RPL7P38 ribosomal protein L7 pseudogene 38 3.1699 0.0000
2 ENSG00000253571 transcriptional adaptor 1 (TADA1) pseudogene 2.4037 0.0000
3 ENSG00000118193 KIF14 kinesin family member 14 2.3219 0.0000
4 ENSG00000227735 CYCSP5 CYCS pseudogene 5 2.3219 0.0007
5 ENSG00000229132 EIF4A1P10 eukaryotic translation initiation factor 4A1 pseudogene 10 2.3219 0.0000
6 ENSG00000230301 OR5H6 olfactory receptor family 5 subfamily H member 6 (gene/pseudogene) 2.3219 0.0000
7 ENSG00000235746 CTBP2P2 CTBP2 pseudogene 2 2.3219 0.0000
8 ENSG00000250826 HNRNPA3P13 heterogeneous nuclear ribonucleoprotein A3 pseudogene 13 2.3219 0.0007
9 ENSG00000257703 novel transcript 2.3219 0.0007
10 ENSG00000258455 novel transcript 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63221 ENSG00000165943 MOAP1 modulator of apoptosis 1 -1.7481 0.0000
63220 ENSG00000183160 TMEM119 transmembrane protein 119 -1.7481 0.0000
63219 ENSG00000230788 novel pseudogene -1.7481 0.0063
63218 ENSG00000226124 FTCDNL1 formiminotransferase cyclodeaminase N-terminal like -1.7475 0.0000
63217 ENSG00000204644 ZFP57 ZFP57 zinc finger protein -1.7472 0.0000
63216 ENSG00000168792 ABHD15 abhydrolase domain containing 15 -1.7465 0.0000
63215 ENSG00000162373 BEND5 BEN domain containing 5 -1.7463 0.0000
63214 ENSG00000236651 DLX2-DT DLX2 divergent transcript -1.7460 0.0000
63213 ENSG00000264675 MIR4285 microRNA 4285 -1.7459 0.0000
63212 ENSG00000277521 MIR8078 microRNA 8078 -1.7458 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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