SHOGoiN Cell Methylome: GSM2481541

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2481541


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7010000000000000000000-771Sequence Read ArchiveSRP074598SRP074598_M14Single-cell DNA methylome sequencing of human preimplantation embryosMethylome4-cell embryoHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000239473 RPL7P38 ribosomal protein L7 pseudogene 38 3.1699 0.0000
2 ENSG00000253571 transcriptional adaptor 1 (TADA1) pseudogene 2.4037 0.0000
3 ENSG00000118193 KIF14 kinesin family member 14 2.3219 0.0000
4 ENSG00000227735 CYCSP5 CYCS pseudogene 5 2.3219 0.0007
5 ENSG00000229132 EIF4A1P10 eukaryotic translation initiation factor 4A1 pseudogene 10 2.3219 0.0000
6 ENSG00000230301 OR5H6 olfactory receptor family 5 subfamily H member 6 (gene/pseudogene) 2.3219 0.0000
7 ENSG00000235746 CTBP2P2 C-terminal binding protein 2 pseudogene 2 2.3219 0.0000
8 ENSG00000250826 HNRNPA3P13 heterogeneous nuclear ribonucleoprotein A3 pseudogene 13 2.3219 0.0007
9 ENSG00000257703 novel transcript 2.3219 0.0007
10 ENSG00000258455 novel transcript 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000224101 ELMO1-AS1 ELMO1 antisense RNA 1 -1.7925 0.3853
63340 ENSG00000223870 novel transcript -1.7925 1.0000
63339 ENSG00000198277 pseudogene similar to part of UDP glucuronosyltransferase 2 family protein -1.7925 1.0000
63338 ENSG00000112186 CAP2 cyclase associated actin cytoskeleton regulatory protein 2 -1.7925 0.0026
63337 ENSG00000253084 RNU6-840P RNA, U6 small nuclear 840, pseudogene -1.7924 0.0000
63336 ENSG00000250846 EPHA5-AS1 EPHA5 antisense RNA 1 -1.7917 0.0000
63335 ENSG00000145242 EPHA5 EPH receptor A5 -1.7917 0.0000
63334 ENSG00000180917 CMTR2 cap methyltransferase 2 -1.7904 0.0000
63333 ENSG00000283237 MIR550B1 microRNA 550b-1 -1.7898 0.0000
63332 ENSG00000207771 MIR550A1 microRNA 550a-1 -1.7898 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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