SHOGoiN Cell Methylome: GSM2481551

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2481551


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7010000000000000000000-771Sequence Read ArchiveSRP074598SRP074598_M24Single-cell DNA methylome sequencing of human preimplantation embryosMethylome4-cell embryoHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000278480 zinc finger and BTB domain containing 2 (ZBTB2) pseudogene 3.0000 0.0000
2 ENSG00000226783 TLK1P1 tousled like kinase 1 pseudogene 1 2.3219 0.0007
3 ENSG00000133636 NTS neurotensin 2.0000 0.0044
4 ENSG00000203864 C1orf137 chromosome 1 open reading frame 137 (putative) 2.0000 0.0044
5 ENSG00000211706 TRBV6-1 T cell receptor beta variable 6-1 2.0000 0.0044
6 ENSG00000230376 MEMO1P4 mediator of cell motility 1 pseudogene 4 2.0000 0.0000
7 ENSG00000230948 aurora kinase B (AURKB) pseudogene 2.0000 0.0044
8 ENSG00000235386 pseudogene similar to part of microfibrillar-associated protein 2 (MFAP2) 2.0000 0.0044
9 ENSG00000236187 GJA6P gap junction protein alpha 6, pseudogene 2.0000 0.0044
10 ENSG00000241744 ribosomal protein S6 (RPS6) pseudogene 2.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000242671 LINC02010 long intergenic non-protein coding RNA 2010 -1.5850 0.5982
63340 ENSG00000242372 EIF6 eukaryotic translation initiation factor 6 -1.5850 1.0000
63339 ENSG00000242236 RN7SL594P RNA, 7SL, cytoplasmic 594, pseudogene -1.5850 1.0000
63338 ENSG00000242158 RN7SL361P RNA, 7SL, cytoplasmic 361, pseudogene -1.5850 0.5982
63337 ENSG00000241621 GOLGA2P6 GOLGA2 pseudogene 6 -1.5850 1.0000
63336 ENSG00000241588 RN7SL484P RNA, 7SL, cytoplasmic 484, pseudogene -1.5850 1.0000
63335 ENSG00000240951 MTCO2P6 MT-CO2 pseudogene 6 -1.5850 1.0000
63334 ENSG00000240863 RN7SL645P RNA, 7SL, cytoplasmic 645, pseudogene -1.5850 0.3685
63333 ENSG00000240859 novel transcript -1.5850 0.2360
63332 ENSG00000240309 MTCO1P6 MT-CO1 pseudogene 6 -1.5850 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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