SHOGoiN Cell Methylome: GSM2481569

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2481569


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7180101000000000000000-755Sequence Read ArchiveSRP074598SRP074598_M42Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeGV oocyteHumanGenitaliaBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000279814 TEC 2.9037 0.0000
2 ENSG00000169252 ADRB2 adrenoceptor beta 2 2.5850 0.0000
3 ENSG00000203710 CR1 complement C3b/C4b receptor 1 (Knops blood group) 2.5850 0.0000
4 ENSG00000225779 novel pseudogene 2.5850 0.0000
5 ENSG00000277876 myoneurin (MYNN) pseudogene 2.5850 0.0000
6 ENSG00000254456 novel transcript 2.4973 0.0000
7 ENSG00000108958 succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa (SDHC) pseudogene 2.3219 0.0000
8 ENSG00000196812 ZSCAN16 zinc finger and SCAN domain containing 16 2.3219 0.0001
9 ENSG00000214265 novel protein 2.3219 0.0000
10 ENSG00000227339 THRAP3P1 thyroid hormone receptor associated protein 3 pseudogene 1 2.3219 0.0001

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000261037 novel transcript -1.5850 0.3876
63340 ENSG00000260771 novel transcript -1.5850 0.2486
63339 ENSG00000260566 novel transcript -1.5850 1.0000
63338 ENSG00000260326 PHBP21 prohibitin pseudogene 21 -1.5850 1.0000
63337 ENSG00000260317 novel transcript -1.5850 0.6287
63336 ENSG00000259557 HMGN1P26 high mobility group nucleosome binding domain 1 pseudogene 26 -1.5850 1.0000
63335 ENSG00000259151 CAP2P1 cyclase associated actin cytoskeleton regulatory protein 2 pseudogene 1 -1.5850 1.0000
63334 ENSG00000259142 LINC00644 long intergenic non-protein coding RNA 644 -1.5850 0.6132
63333 ENSG00000259097 novel transcript -1.5850 1.0000
63332 ENSG00000259086 KIAA1143 (KIAA1143) pseudogene -1.5850 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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