Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2481583

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2481583 Profile download	7180101000000000000000-755	Sequence Read Archive	SRP074598	SRP074598_M56	Single-cell DNA methylome sequencing of human preimplantation embryos	Methylome	GV oocyte	Human	Genitalia	Bisulfite-Seq (PBAT)	HiSeq 2500	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSG00000124193	SRSF6	serine and arginine rich splicing factor 6	2.2224	0.0000
2	ENSG00000206998		Y RNA	2.2224	0.0000
3	ENSG00000100271	TTLL1	tubulin tyrosine ligase like 1	2.0000	0.0000
4	ENSG00000152620	NADK2	NAD kinase 2, mitochondrial	2.0000	0.0000
5	ENSG00000233491		novel pseudogene containing cadherin repeats	2.0000	0.0009
6	ENSG00000234735		ribosomal protein S25 (RPS25) pseudogene	2.0000	0.0000
7	ENSG00000257542	OR7E47P	olfactory receptor family 7 subfamily E member 47 pseudogene	1.7925	0.0000
8	ENSG00000257663		novel transcript, antisense to C12orf44	1.7925	0.0000
10	ENSG00000068784	SRBD1	S1 RNA binding domain 1	1.5850	0.0092
63119	ENSG00000283765		novel protein	-1.0000	1.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
63128	ENSG00000283863	MIR3960	microRNA 3960	-1.0000	1.0000
63127	ENSG00000283858	MIR3674	microRNA 3674	-1.0000	1.0000
63126	ENSG00000283848	MIR6872	microRNA 6872	-1.0000	1.0000
63125	ENSG00000283836	MIR6734	microRNA 6734	-1.0000	0.3889
63124	ENSG00000283829	MIR378I	microRNA 378i	-1.0000	0.1076
63123	ENSG00000283815	MIR18A	microRNA 18a	-1.0000	1.0000
63122	ENSG00000283796	MIR6510	microRNA 6510	-1.0000	0.6129
63121	ENSG00000283788	MIR936	microRNA 936	-1.0000	1.0000
63120	ENSG00000283782		novel protein	-1.0000	1.0000
63119	ENSG00000283765		novel protein	-1.0000	1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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