SHOGoiN Cell Methylome: GSM2481641

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2481641


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7010000000000000000000-772Sequence Read ArchiveSRP074598SRP074598_M114Single-cell DNA methylome sequencing of human preimplantation embryosMethylome8-cell embryoHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000273010 novel transcript, antisense to LRIF1 3.1699 0.0000
2 ENSG00000231255 novel transcript 2.8074 0.0004
3 ENSG00000242922 RPL21P104 ribosomal protein L21 pseudogene 104 2.8074 0.0004
4 ENSG00000280185 tec 2.8074 0.0004
5 ENSG00000232039 DEFT1P2 defensin theta 1, pseudogene 2 2.7500 0.0000
6 ENSG00000173285 OR10K1 olfactory receptor family 10 subfamily K member 1 2.5850 0.0016
7 ENSG00000222202 RNU4-26P RNA, U4 small nuclear 26, pseudogene 2.5850 0.0016
8 ENSG00000249806 novel transcript 2.5850 0.0016
9 ENSG00000254352 chromosome 4 open reading frame 46 (C4orf46) pseudogene 2.5850 0.0000
10 ENSG00000280144 tec 2.5850 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000272121 novel transcript -1.7959 0.0000
63340 ENSG00000279472 novel transcript -1.7958 0.0000
63339 ENSG00000120322 PCDHB8 protocadherin beta 8 -1.7958 0.0000
63338 ENSG00000164051 CCDC51 coiled-coil domain containing 51 -1.7953 0.0000
63337 ENSG00000284200 MIR6847 microRNA 6847 -1.7949 0.0000
63336 ENSG00000235078 novel transcript, antisense to ADI1 -1.7938 0.0000
63335 ENSG00000197951 ZNF71 zinc finger protein 71 -1.7935 0.0000
63334 ENSG00000276609 NA -1.7934 0.0000
63333 ENSG00000119283 TRIM67 tripartite motif containing 67 -1.7931 0.0000
63332 ENSG00000278305 novel transcript -1.7925 0.3319

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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