SHOGoiN Cell Methylome: GSM2481647

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2481647


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M120Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000115138 POMC proopiomelanocortin 2.3219 0.0005
2 ENSG00000167799 NUDT8 nudix hydrolase 8 2.3219 0.0000
3 ENSG00000199964 NA 2.3219 0.0005
4 ENSG00000238705 MIR1976 microRNA 1976 2.0844 0.0000
5 ENSG00000165121 kinesin family member 27 (KIF27) pseudogene 2.0000 0.0000
6 ENSG00000176555 OR4S1 olfactory receptor family 4 subfamily S member 1 2.0000 0.0031
7 ENSG00000186377 CYP4X1 cytochrome P450 family 4 subfamily X member 1 2.0000 0.0031
8 ENSG00000205329 OR6C3 olfactory receptor family 6 subfamily C member 3 2.0000 0.0000
9 ENSG00000207717 MIR551B microRNA 551b 2.0000 0.0000
10 ENSG00000212589 NA 2.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000259507 zinc finger CCHC domain-containing protein 9 (ZCCHC9) pseudogene -1.5850 1.0000
63340 ENSG00000259333 intercellular adhesion molecule (ICAM) pseudogene -1.5850 1.0000
63339 ENSG00000259215 novel transcript -1.5850 0.0029
63338 ENSG00000259194 novel transcript, intronic to GLDN -1.5850 0.6129
63337 ENSG00000259118 novel transcript, antisense to MAX -1.5850 1.0000
63336 ENSG00000259104 PTCSC3 papillary thyroid carcinoma susceptibility candidate 3 -1.5850 1.0000
63335 ENSG00000259005 novel transcript -1.5850 0.6022
63334 ENSG00000258854 novel transcript, antisense to GNG2 and C14orf166 -1.5850 1.0000
63333 ENSG00000258744 novel transcript, antisense to CMA1 -1.5850 0.6022
63332 ENSG00000258722 CKAP2P1 cytoskeleton associated protein 2 pseudogene 1 -1.5850 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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