SHOGoiN Cell Methylome: GSM2481657

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2481657


Profile download
5090101000001000000000-236Sequence Read ArchiveSRP074598SRP074598_M130Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeSpermHumanGenitaliaBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000207763 MIR617 microRNA 617 2.9183 0.0000
2 ENSG00000183891 TTC32 tetratricopeptide repeat domain 32 2.8074 0.0024
3 ENSG00000232385 RPS3AP25 ribosomal protein S3a pseudogene 25 2.8074 0.0024
4 ENSG00000271070 GMCL1P2 GMCL1 pseudogene 2 2.8074 0.0000
5 ENSG00000271991 novel transcript 2.8074 0.0024
6 ENSG00000252707 RNU11-2P RNA, U11 small nuclear 2, pseudogene 2.6962 0.0000
7 ENSG00000206908 RNU1-136P RNA, U1 small nuclear 136, pseudogene 2.6739 0.0000
8 ENSG00000215274 GAGE10 G antigen 10 2.6499 0.0000
9 ENSG00000177186 OR2M7 olfactory receptor family 2 subfamily M member 7 2.5850 0.0065
10 ENSG00000223683 RPSAP65 ribosomal protein SA pseudogene 65 2.5850 0.0065

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000206741 NA -1.8431 0.0000
63340 ENSG00000214870 novel transcript -1.8421 0.0000
63339 ENSG00000197472 ZNF695 zinc finger protein 695 -1.8420 0.0000
63338 ENSG00000186665 C17orf58 chromosome 17 open reading frame 58 -1.8414 0.0000
63337 ENSG00000197568 HHLA3 HERV-H LTR-associating 3 -1.8409 0.0000
63336 ENSG00000243147 MRPL33 mitochondrial ribosomal protein L33 -1.8387 0.0000
63335 ENSG00000185019 UBOX5 U-box domain containing 5 -1.8385 0.0000
63334 ENSG00000271810 novel protein, PPM1J-RHOC readthrough -1.8376 0.0000
63333 ENSG00000283461 MIR550B2 microRNA 550b-2 -1.8368 0.0000
63332 ENSG00000207573 MIR550A2 microRNA 550a-2 -1.8368 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...