SHOGoiN Cell Methylome: GSM2773517

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773517


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M144Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000222880 RN7SKP261 RN7SK pseudogene 261 2.5850 0.0000
2 ENSG00000270708 GABA(A) receptor-associated protein-like 2 (GABARAPL2) pseudogene 2.5850 0.0000
3 ENSG00000239808 RN7SL255P RNA, 7SL, cytoplasmic 255, pseudogene 2.3821 0.0000
4 ENSG00000279780 novel transcript 2.3510 0.0000
5 ENSG00000279795 novel transcript 2.3510 0.0000
6 ENSG00000224059 HSPA8P16 heat shock protein family A (Hsp70) member 8 pseudogene 16 2.3219 0.0019
7 ENSG00000227418 PCGEM1 PCGEM1 prostate-specific transcript 2.3219 0.0019
8 ENSG00000233774 MED14P1 mediator complex subunit 14 pseudogene 1 2.3219 0.0000
9 ENSG00000249425 LINC02477 long intergenic non-protein coding RNA 2477 2.3219 0.0000
10 ENSG00000251951 RN7SKP34 RN7SK pseudogene 34 2.3219 0.0019

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000143921 ABCG8 ATP binding cassette subfamily G member 8 -2.0481 0.0000
63340 ENSG00000263305 novel transcript -2.0474 0.0000
63339 ENSG00000235192 novel transcript -2.0471 0.0000
63338 ENSG00000260634 novel transcript -2.0467 0.0000
63337 ENSG00000140323 DISP2 dispatched RND transporter family member 2 -2.0467 0.0000
63336 ENSG00000162873 KLHDC8A kelch domain containing 8A -2.0465 0.0000
63335 ENSG00000177476 OR2G3 olfactory receptor family 2 subfamily G member 3 -2.0465 0.0001
63334 ENSG00000175093 SPSB4 splA/ryanodine receptor domain and SOCS box containing 4 -2.0465 0.0000
63333 ENSG00000198932 GPRASP1 G protein-coupled receptor associated sorting protein 1 -2.0463 0.0000
63332 ENSG00000153165 RGPD3 RANBP2 like and GRIP domain containing 3 -2.0463 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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