Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773518

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2773518 Profile download	7010000000000000000000-773	Sequence Read Archive	SRP074598	SRP074598_M145	Single-cell DNA methylome sequencing of human preimplantation embryos	Methylome	Morula	Human	Early embryonic tissue	Bisulfite-Seq (PBAT)	HiSeq 2500	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSG00000248639		UDP glucuronos...yltransferase 2 family, polypeptide B4 (UGT2B4) pseudogene	3.4594	0.0000
4	ENSG00000280379		novel transcript	2.7429	0.0000
5	ENSG00000207957	MIR105-1	microRNA 105-1	2.6462	0.0000
6	ENSG00000211583	MIR767	microRNA 767	2.6462	0.0000
7	ENSG00000236861	BET1-AS1	BET1 antisense RNA 1	2.6455	0.0000
8	ENSG00000183909	OR4G2P	olfactory receptor family 4 subfamily G member 2 pseudogene	2.6103	0.0000
9	ENSG00000248195		novel transcript	2.5850	0.0009
10	ENSG00000279530		TEC	2.5850	0.0009
63119	ENSG00000177943	MAMDC4	MAM domain containing 4	-2.2652	0.0000
63120	ENSG00000167741	GGT6	gamma-glutamyltransferase 6	-2.2652	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
63128	ENSG00000270100		novel transcript	-2.2677	0.0000
63127	ENSG00000265043		novel transcript	-2.2672	0.0000
63126	ENSG00000119714	GPR68	G protein-coupled receptor 68	-2.2671	0.0000
63125	ENSG00000235079	ZRANB2-AS1	ZRANB2 antisense RNA 1	-2.2668	0.0000
63124	ENSG00000279135		TEC	-2.2657	0.0000
63123	ENSG00000255089		novel transcript, antisense to IFITM3	-2.2655	0.0000
63122	ENSG00000272606	PPP4R3B-DT	PPP4R3B divergent transcript	-2.2653	0.0000
63121	ENSG00000223356		novel transcript	-2.2653	0.0000
63120	ENSG00000167741	GGT6	gamma-glutamyltransferase 6	-2.2652	0.0000
63119	ENSG00000177943	MAMDC4	MAM domain containing 4	-2.2652	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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