Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773518

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773518


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M145Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000248639 UDP glucuronos...yltransferase 2 family, polypeptide B4 (UGT2B4) pseudogene 3.4594 0.0000
4 ENSG00000280379 novel transcript 2.7429 0.0000
5 ENSG00000207957 MIR105-1 microRNA 105-1 2.6462 0.0000
6 ENSG00000211583 MIR767 microRNA 767 2.6462 0.0000
7 ENSG00000236861 BET1-AS1 BET1 antisense RNA 1 2.6455 0.0000
8 ENSG00000183909 OR4G2P olfactory receptor family 4 subfamily G member 2 pseudogene 2.6103 0.0000
9 ENSG00000248195 novel transcript 2.5850 0.0009
10 ENSG00000279530 TEC 2.5850 0.0009
63119 ENSG00000177943 MAMDC4 MAM domain containing 4 -2.2652 0.0000
63120 ENSG00000167741 GGT6 gamma-glutamyltransferase 6 -2.2652 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63128 ENSG00000270100 novel transcript -2.2677 0.0000
63127 ENSG00000265043 novel transcript -2.2672 0.0000
63126 ENSG00000119714 GPR68 G protein-coupled receptor 68 -2.2671 0.0000
63125 ENSG00000235079 ZRANB2-AS1 ZRANB2 antisense RNA 1 -2.2668 0.0000
63124 ENSG00000279135 TEC -2.2657 0.0000
63123 ENSG00000255089 novel transcript, antisense to IFITM3 -2.2655 0.0000
63122 ENSG00000272606 PPP4R3B-DT PPP4R3B divergent transcript -2.2653 0.0000
63121 ENSG00000223356 novel transcript -2.2653 0.0000
63120 ENSG00000167741 GGT6 gamma-glutamyltransferase 6 -2.2652 0.0000
63119 ENSG00000177943 MAMDC4 MAM domain containing 4 -2.2652 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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