Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Methylome: GSM2773518
Methylation Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM2773518
Profile download
7010000000000000000000-773
Sequence Read Archive
SRP074598
SRP074598_M145
Single-cell DNA methylome sequencing of human preimplantation embryos
Methylome
Morula
Human
Early embryonic tissue
Bisulfite-Seq (PBAT)
HiSeq 2500
Sequence
Histogram (P-value of methylation rate)
Top 10 methylated genes
Rank
ENSG
Gene symbol
Description
M-value
P-vaue
1
ENSG00000248639
UDP glucuronos...yltransferase 2 family, polypeptide B4 (UGT2B4) pseudogene
3.4594
0.0000
4
ENSG00000280379
novel transcript
2.7429
0.0000
5
ENSG00000207957
MIR105-1
microRNA 105-1
2.6462
0.0000
6
ENSG00000211583
MIR767
microRNA 767
2.6462
0.0000
7
ENSG00000236861
BET1-AS1
BET1 antisense RNA 1
2.6455
0.0000
8
ENSG00000183909
OR4G2P
olfactory receptor family 4 subfamily G member 2 pseudogene
2.6103
0.0000
9
ENSG00000248195
novel transcript
2.5850
0.0009
10
ENSG00000279530
TEC
2.5850
0.0009
63119
ENSG00000177943
MAMDC4
MAM domain containing 4
-2.2652
0.0000
63120
ENSG00000167741
GGT6
gamma-glutamyltransferase 6
-2.2652
0.0000
Bottom 10 methylated genes
Rank
ENSG
Gene symbol
Description
M-value
P-value
63128
ENSG00000270100
novel transcript
-2.2677
0.0000
63127
ENSG00000265043
novel transcript
-2.2672
0.0000
63126
ENSG00000119714
GPR68
G protein-coupled receptor 68
-2.2671
0.0000
63125
ENSG00000235079
ZRANB2-AS1
ZRANB2 antisense RNA 1
-2.2668
0.0000
63124
ENSG00000279135
TEC
-2.2657
0.0000
63123
ENSG00000255089
novel transcript, antisense to IFITM3
-2.2655
0.0000
63122
ENSG00000272606
PPP4R3B-DT
PPP4R3B divergent transcript
-2.2653
0.0000
63121
ENSG00000223356
novel transcript
-2.2653
0.0000
63120
ENSG00000167741
GGT6
gamma-glutamyltransferase 6
-2.2652
0.0000
63119
ENSG00000177943
MAMDC4
MAM domain containing 4
-2.2652
0.0000
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
M-value
P-value
full
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