SHOGoiN Cell Methylome: GSM2773519

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773519


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M146Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000231841 FAM192BP family with sequence similarity 192 member B, pseudogene 3.1699 0.0000
2 ENSG00000278206 novel transcript 3.0542 0.0000
3 ENSG00000207653 MIR558 microRNA 558 2.8074 0.0000
4 ENSG00000232916 HMGN2P27 high mobility group nucleosomal binding domain 2 pseudogene 27 2.5850 0.0006
5 ENSG00000227240 novel transcript 2.5480 0.0000
6 ENSG00000251889 RNU4-49P RNA, U4 small nuclear 49, pseudogene 2.4183 0.0000
7 ENSG00000183395 PMCH pro-melanin concentrating hormone 2.4037 0.0000
8 ENSG00000256564 novel transcript 2.4037 0.0000
9 ENSG00000281344 HELLPAR HELLP associated long non-coding RNA 2.4037 0.0000
10 ENSG00000231926 SEPHS1P7 selenophosphate synthetase 1 pseudogene 7 2.3900 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000274520 NA -2.3364 0.0000
63340 ENSG00000166923 GREM1 gremlin 1, DAN family BMP antagonist -2.3362 0.0000
63339 ENSG00000258482 TRAV15 T cell receptor alpha variable 15 (pseudogene) -2.3357 0.0000
63338 ENSG00000175164 ABO ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase -2.3356 0.0000
63337 ENSG00000169750 RAC3 Rac family small GTPase 3 -2.3347 0.0000
63336 ENSG00000101825 MXRA5 matrix remodeling associated 5 -2.3346 0.0000
63335 ENSG00000186297 GABRA5 gamma-aminobutyric acid type A receptor alpha5 subunit -2.3346 0.0000
63334 ENSG00000144119 C1QL2 complement C1q like 2 -2.3344 0.0000
63333 ENSG00000152402 GUCY1A2 guanylate cyclase 1 soluble subunit alpha 2 -2.3344 0.0000
63332 ENSG00000123178 SPRYD7 SPRY domain containing 7 -2.3344 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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