SHOGoiN Cell Methylome: GSM2773523

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773523


Profile download
7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M150Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000199202 RNA5SP289 RNA, 5S ribosomal pseudogene 289 2.6455 0.0000
2 ENSG00000270683 FAM71BP1 family with sequence similarity 71 member B pseudogene 1 2.5850 0.0002
3 ENSG00000200120 NA 2.3219 0.0000
4 ENSG00000226253 MRPL35P3 mitochondrial ribosomal protein L35 pseudogene 3 2.3219 0.0000
5 ENSG00000227016 novel transcript 2.3219 0.0013
6 ENSG00000242080 ribosomal protein L36a (RPL36A) pseudogene 2.3219 0.0013
7 ENSG00000242922 RPL21P104 ribosomal protein L21 pseudogene 104 2.3219 0.0013
8 ENSG00000264699 LINC01912 long intergenic non-protein coding RNA 1912 2.3219 0.0000
9 ENSG00000267146 novel transcript, antisense to WDR7 2.3219 0.0013
10 ENSG00000254132 MTND6P3 MT-ND6 pseudogene 3 2.2788 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000243702 RN7SL638P RNA, 7SL, cytoplasmic 638, pseudogene -2.1118 0.0000
63340 ENSG00000105173 CCNE1 cyclin E1 -2.1115 0.0000
63339 ENSG00000198704 GPX6 glutathione peroxidase 6 -2.1115 0.0000
63338 ENSG00000271711 Sin3A-associated protein, 30kDa, pseudogene. -2.1110 0.0000
63337 ENSG00000203684 IBA57-DT IBA57 divergent transcript -2.1108 0.0000
63336 ENSG00000233028 ribonuclease T2 (RNASET2) pseudogene -2.1108 0.0000
63335 ENSG00000231445 TIMM8AP1 translocase of inner mitochondrial membrane 8A pseudogene 1 -2.1105 0.0000
63334 ENSG00000196092 PAX5 paired box 5 -2.1104 0.0000
63333 ENSG00000231349 ribosomal protein L7 (RPL7) pseudogene -2.1094 0.0000
63332 ENSG00000160951 PTGER1 prostaglandin E receptor 1 -2.1092 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...