SHOGoiN Cell Methylome: GSM2773533

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773533


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M160Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000212461 NA 3.0850 0.0000
2 ENSG00000248423 clathrin, light chain (Lca) (CLTA) pseudogene 2.9886 0.0000
3 ENSG00000201775 RNU6-1325P RNA, U6 small nuclear 1325, pseudogene 2.8074 0.0000
4 ENSG00000253130 novel transcript 2.8074 0.0000
5 ENSG00000253343 novel transcript 2.8074 0.0000
6 ENSG00000253774 novel transcript 2.8074 0.0000
7 ENSG00000279190 novel transcript 2.8074 0.0002
8 ENSG00000258566 H1 histone family, member O, oocyte-specific (H1FOO) pseudogene 2.7500 0.0000
10 ENSG00000186523 FAM86B1 family with sequence similarity 86 member B1 2.5850 0.0000
63332 ENSG00000173401 GLIPR1L1 GLIPR1 like 1 -2.0296 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000158553 POM121L2 POM121 transmembrane nucleoporin like 2 -2.0344 0.0000
63340 ENSG00000228653 HNRNPCP7 heterogeneous nuclear ribonucleoprotein C pseudogene 7 -2.0343 0.0000
63339 ENSG00000225337 novel transcript -2.0334 0.0000
63338 ENSG00000270424 PRKC, apoptosis, WT1, regulator (PAWR) pseudogene -2.0326 0.0000
63337 ENSG00000161956 SENP3 SUMO specific peptidase 3 -2.0307 0.0000
63336 ENSG00000170775 GPR37 G protein-coupled receptor 37 -2.0305 0.0000
63335 ENSG00000076716 GPC4 glypican 4 -2.0301 0.0000
63334 ENSG00000279151 novel transcript -2.0299 0.0000
63333 ENSG00000279113 novel transcript -2.0296 0.0000
63332 ENSG00000173401 GLIPR1L1 GLIPR1 like 1 -2.0296 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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