SHOGoiN Cell Methylome: GSM2773535

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773535


Profile download
7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M162Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000249981 novel transcript 3.0000 0.0001
2 ENSG00000250387 LINC02197 long intergenic non-protein coding RNA 2197 3.0000 0.0001
3 ENSG00000146757 ZNF92 zinc finger protein 92 2.8074 0.0000
4 ENSG00000233272 PNPT1P2 polyribonucleotide nucleotidyltransferase 1 pseudogene 2 2.3774 0.0000
5 ENSG00000252149 RNA5SP315 RNA, 5S ribosomal pseudogene 315 2.3307 0.0000
6 ENSG00000229201 novel transcript 2.3219 0.0000
7 ENSG00000248511 novel transcript 2.3219 0.0000
8 ENSG00000254753 novel transcript 2.3219 0.0000
9 ENSG00000254895 MTCO3P15 MT-CO3 pseudogene 15 2.3219 0.0039
10 ENSG00000283246 MEP1AP1 meprin A subunit alpha pseudogene 1 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000259603 novel transcript, antisense to IRX1 -1.8644 0.0000
63340 ENSG00000234965 SHISA8 shisa family member 8 -1.8641 0.0000
63339 ENSG00000172803 SNX32 sorting nexin 32 -1.8640 0.0000
63338 ENSG00000277214 novel transcript -1.8638 0.0000
63337 ENSG00000099219 ERMP1 endoplasmic reticulum metallopeptidase 1 -1.8636 0.0000
63336 ENSG00000230778 ANKRD63 ankyrin repeat domain 63 -1.8633 0.0000
63335 ENSG00000276100 NA -1.8633 0.0000
63334 ENSG00000214188 ST7-OT4 ST7 overlapping transcript 4 -1.8633 0.0000
63333 ENSG00000201852 RNU6-702P RNA, U6 small nuclear 702, pseudogene -1.8631 0.0000
63332 ENSG00000183784 C9orf66 chromosome 9 open reading frame 66 -1.8630 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...