SHOGoiN Cell Methylome: GSM2773538

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773538


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M165Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000248987 PRDX4P1 peroxiredoxin 4 pseudogene 1 3.0000 0.0000
2 ENSG00000281593 novel protein, ZNRF2-LINC01176 readthrough 2.8074 0.0000
3 ENSG00000202019 NA 2.5850 0.0000
4 ENSG00000202379 NA 2.5850 0.0002
5 ENSG00000224599 BMS1P12 BMS1 pseudogene 12 2.5850 0.0000
6 ENSG00000233557 NFU1P2 NFU1 iron-sulfur cluster scaffold pseudogene 2 2.5850 0.0000
7 ENSG00000276763 ribosomal protein L10 (RPL10) pseudogene 2.5850 0.0002
8 ENSG00000283130 mitochondrially encoded NADH dehydrogenase 5 (MT-ND5) pseudogene 2.5850 0.0002
9 ENSG00000273701 NA 2.5192 0.0000
10 ENSG00000282137 OR4G3P olfactory receptor family 4 subfamily G member 3 pseudogene 2.5161 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000148156 ACTL7B actin like 7B -2.2899 0.0000
63340 ENSG00000123447 TYRL tyrosinase like (pseudogene) -2.2891 0.0000
63339 ENSG00000107443 CCNJ cyclin J -2.2890 0.0000
63338 ENSG00000265392 MIR4252 microRNA 4252 -2.2887 0.0000
63337 ENSG00000247095 MIR210HG MIR210 host gene -2.2884 0.0000
63336 ENSG00000135040 NAA35 N(alpha)-acetyltransferase 35, NatC auxiliary subunit -2.2883 0.0000
63335 ENSG00000146676 PURB purine rich element binding protein B -2.2882 0.0000
63334 ENSG00000200320 SNORA63 small nucleolar RNA, H/ACA box 63 -2.2881 0.0000
63333 ENSG00000242853 RN7SL749P RNA, 7SL, cytoplasmic 749, pseudogene -2.2878 0.0000
63332 ENSG00000214796 tubulin, alpha (TUBA) pseudogene -2.2877 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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