Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773540

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2773540 Profile download	7010000000000000000000-773	Sequence Read Archive	SRP074598	SRP074598_M167	Single-cell DNA methylome sequencing of human preimplantation embryos	Methylome	Morula	Human	Early embryonic tissue	Bisulfite-Seq (PBAT)	HiSeq 2500	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSG00000250768	DPP3P1	DPP3 pseudogene 1	2.8074	0.0000
2	ENSG00000259244		novel transcript	2.6962	0.0000
3	ENSG00000232982	MTCO1P45	MT-CO1 pseudogene 45	2.5207	0.0000
4	ENSG00000238789	RNU7-152P	RNA, U7 small nuclear 152 pseudogene	2.4534	0.0000
5	ENSG00000213673	SLC25A5P3	solute carrier family 25 member 5 pseudogene 3	2.3219	0.0010
6	ENSG00000222715	MIR1911	microRNA 1911	2.3219	0.0010
7	ENSG00000226680		novel transcript	2.3219	0.0010
8	ENSG00000227480	CCDC148-AS1	CCDC148 antisense RNA 1	2.3219	0.0010
9	ENSG00000231201		novel transcript	2.3219	0.0010
10	ENSG00000236666	POTEH-AS1	POTEH antisense RNA 1	2.3219	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
63128	ENSG00000112164	GLP1R	glucagon like peptide 1 receptor	-1.8978	0.0000
63127	ENSG00000117592	PRDX6	peroxiredoxin 6	-1.8975	0.0000
63126	ENSG00000135525	MAP7	microtubule associated protein 7	-1.8974	0.0000
63125	ENSG00000231359		ribosomal protein L31 (RPL31) pseudogene	-1.8974	0.0000
63124	ENSG00000260902	LINC02011	long intergenic non-protein coding RNA 2011	-1.8972	0.0000
63123	ENSG00000233069		novel transcript	-1.8966	0.0000
63122	ENSG00000278530	CHMP1B2P	charged multivesicular body protein 1B2, pseudogene	-1.8962	0.0229
63121	ENSG00000144015	TRIM43	tripartite motif containing 43	-1.8962	0.1416
63120	ENSG00000248184	LINC02283	long intergenic non-protein coding RNA 2283	-1.8962	0.0000
63119	ENSG00000214736	TOMM6	translocase of outer mitochondrial membrane 6	-1.8962	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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