SHOGoiN Cell Methylome: GSM2773540

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773540


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M167Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000250768 DPP3P1 dipeptidyl peptidase 3 pseudogene 1 2.8074 0.0000
2 ENSG00000259244 novel transcript 2.6962 0.0000
3 ENSG00000232982 MTCO1P45 MT-CO1 pseudogene 45 2.5207 0.0000
4 ENSG00000238789 RNU7-152P RNA, U7 small nuclear 152 pseudogene 2.4534 0.0000
5 ENSG00000213673 SLC25A5P3 solute carrier family 25 member 5 pseudogene 3 2.3219 0.0010
6 ENSG00000222715 MIR1911 microRNA 1911 2.3219 0.0010
7 ENSG00000226680 novel transcript 2.3219 0.0010
8 ENSG00000227480 CCDC148-AS1 CCDC148 antisense RNA 1 2.3219 0.0010
9 ENSG00000231201 novel transcript 2.3219 0.0010
10 ENSG00000236666 POTEH-AS1 POTEH antisense RNA 1 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000272691 novel transcript -1.9660 0.0000
63340 ENSG00000275372 NA -1.9660 0.0000
63339 ENSG00000143994 ABHD1 abhydrolase domain containing 1 -1.9657 0.0000
63338 ENSG00000189292 ALKAL2 ALK and LTK ligand 2 -1.9657 0.0000
63337 ENSG00000230306 BANF1P2 barrier to autointegration factor 1 pseudogene 2 -1.9647 0.0000
63336 ENSG00000230778 ANKRD63 ankyrin repeat domain 63 -1.9642 0.0000
63335 ENSG00000231530 novel transcript -1.9639 0.0000
63334 ENSG00000001167 NFYA nuclear transcription factor Y subunit alpha -1.9633 0.0000
63333 ENSG00000277778 PGM5P2 phosphoglucomutase 5 pseudogene 2 -1.9631 0.0000
63332 ENSG00000175785 PRIMA1 proline rich membrane anchor 1 -1.9617 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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