SHOGoiN Cell Methylome: GSM2773547

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773547


Profile download
7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M174Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000267524 RPSAP57 ribosomal protein SA pseudogene 57 3.3219 0.0000
2 ENSG00000212539 NA 3.1699 0.0000
3 ENSG00000258892 novel transcript 3.1699 0.0000
4 ENSG00000198019 FCGR1B Fc fragment of IgG receptor Ib 3.0000 0.0000
5 ENSG00000221930 FAM45BP family with sequence similarity 45 member B, pseudogene 3.0000 0.0000
6 ENSG00000252537 NA 3.0000 0.0000
7 ENSG00000233852 novel transcript 2.9886 0.0000
8 ENSG00000203942 C10orf62 chromosome 10 open reading frame 62 2.8074 0.0001
9 ENSG00000224152 novel transcript, antisense to BAZ2B 2.8074 0.0001
10 ENSG00000233663 melanoma antigen pseudogene 2.8074 0.0001

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000242659 novel transcript -2.1989 0.0000
63340 ENSG00000277888 MIR6846 microRNA 6846 -2.1987 0.0000
63339 ENSG00000170677 SOCS6 suppressor of cytokine signaling 6 -2.1986 0.0000
63338 ENSG00000278708 NA -2.1976 0.0000
63337 ENSG00000107372 ZFAND5 zinc finger AN1-type containing 5 -2.1973 0.0000
63336 ENSG00000246560 UBE2D3-AS1 UBE2D3 antisense RNA 1 -2.1963 0.0000
63335 ENSG00000231228 cAMP-regulated phosphoprotein, 19kDa (ARPP19) pseudogene -2.1963 0.0000
63334 ENSG00000168936 TMEM129 transmembrane protein 129 -2.1958 0.0000
63333 ENSG00000154478 GPR26 G protein-coupled receptor 26 -2.1954 0.0000
63332 ENSG00000239513 LINC01210 long intergenic non-protein coding RNA 1210 -2.1948 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...