SHOGoiN Cell Methylome: GSM2773547
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM2773547 Profile download | 7010000000000000000000-773 | Sequence Read Archive | SRP074598 | SRP074598_M174 | Single-cell DNA methylome sequencing of human preimplantation embryos | Methylome | Morula | Human | Early embryonic tissue | Bisulfite-Seq (PBAT) | HiSeq 2500 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSG00000267524 | RPSAP57 | ribosomal protein SA pseudogene 57 | 3.3219 | 0.0000 |
| 2 | ENSG00000212539 | NA | 3.1699 | 0.0000 | |
| 3 | ENSG00000258892 | novel transcript | 3.1699 | 0.0000 | |
| 4 | ENSG00000198019 | FCGR1B | Fc fragment of IgG receptor Ib | 3.0000 | 0.0000 |
| 5 | ENSG00000221930 | FAM45BP | family with sequence similarity 45 member B, pseudogene | 3.0000 | 0.0000 |
| 6 | ENSG00000252537 | NA | 3.0000 | 0.0000 | |
| 7 | ENSG00000233852 | novel transcript | 2.9886 | 0.0000 | |
| 8 | ENSG00000203942 | C10orf62 | chromosome 10 open reading frame 62 | 2.8074 | 0.0001 |
| 9 | ENSG00000224152 | novel transcript, antisense to BAZ2B | 2.8074 | 0.0001 | |
| 10 | ENSG00000233663 | melanoma antigen pseudogene | 2.8074 | 0.0001 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 63341 | ENSG00000242659 | novel transcript | -2.1989 | 0.0000 | |
| 63340 | ENSG00000277888 | MIR6846 | microRNA 6846 | -2.1987 | 0.0000 |
| 63339 | ENSG00000170677 | SOCS6 | suppressor of cytokine signaling 6 | -2.1986 | 0.0000 |
| 63338 | ENSG00000278708 | NA | -2.1976 | 0.0000 | |
| 63337 | ENSG00000107372 | ZFAND5 | zinc finger AN1-type containing 5 | -2.1973 | 0.0000 |
| 63336 | ENSG00000246560 | UBE2D3-AS1 | UBE2D3 antisense RNA 1 | -2.1963 | 0.0000 |
| 63335 | ENSG00000231228 | cAMP-regulated phosphoprotein, 19kDa (ARPP19) pseudogene | -2.1963 | 0.0000 | |
| 63334 | ENSG00000168936 | TMEM129 | transmembrane protein 129 | -2.1958 | 0.0000 |
| 63333 | ENSG00000154478 | GPR26 | G protein-coupled receptor 26 | -2.1954 | 0.0000 |
| 63332 | ENSG00000239513 | LINC01210 | long intergenic non-protein coding RNA 1210 | -2.1948 | 0.0000 |
