Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773547

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773547


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M174Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000267524 RPSAP57 ribosomal protein SA pseudogene 57 3.3219 0.0000
2 ENSG00000212539 Small nucleolar RNA U3 3.1699 0.0000
3 ENSG00000258892 novel transcript 3.1699 0.0000
4 ENSG00000198019 FCGR1B Fc fragment of IgG receptor Ib 3.0000 0.0000
5 ENSG00000221930 DENND10P1 DENND10 pseudogene 1 3.0000 0.0000
6 ENSG00000252537 NA 3.0000 0.0000
7 ENSG00000233852 novel transcript 2.9886 0.0000
8 ENSG00000203942 C10orf62 chromosome 10 open reading frame 62 2.8074 0.0001
9 ENSG00000224152 novel transcript, antisense to BAZ2B 2.8074 0.0001
10 ENSG00000233663 melanoma antigen pseudogene 2.8074 0.0001

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63128 ENSG00000073861 TBX21 T-box transcription factor 21 -2.1283 0.0000
63127 ENSG00000262358 Novel protein, antisense to ITGAE -2.1275 0.0000
63126 ENSG00000170545 SMAGP small cell adhesion glycoprotein -2.1267 0.0000
63125 ENSG00000259884 NR4A1AS NR4A1 antisense RNA -2.1257 0.0000
63124 ENSG00000143761 ARF1 ADP ribosylation factor 1 -2.1255 0.0000
63123 ENSG00000259658 ubiquitin-conjugating enzyme E2Q family member 2 (UBE2Q2) pseudogene -2.1252 0.0000
63122 ENSG00000166148 AVPR1A arginine vasopressin receptor 1A -2.1251 0.0000
63121 ENSG00000136888 ATP6V1G1 ATPase H+ transporting V1 subunit G1 -2.1248 0.0000
63120 ENSG00000181418 DDN dendrin -2.1245 0.0000
63119 ENSG00000235328 ribosomal protein L31 (RPL31) pseudogene -2.1244 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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