SHOGoiN Cell Methylome: GSM2773548

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773548


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M175Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000243861 novel transcript 2.6962 0.0000
2 ENSG00000229082 OR5AW1P olfactory receptor family 5 subfamily AW member 1 pseudogene 2.5850 0.0003
3 ENSG00000279485 TEC 2.4130 0.0000
4 ENSG00000067646 ZFY zinc finger protein Y-linked 2.3219 0.0014
5 ENSG00000201744 RNU6-34P RNA, U6 small nuclear 34, pseudogene 2.3219 0.0014
6 ENSG00000212434 NA 2.3219 0.0014
7 ENSG00000221996 OR52B4 olfactory receptor family 52 subfamily B member 4 (gene/pseudogene) 2.3219 0.0014
8 ENSG00000229163 NAP1L1P2 nucleosome assembly protein 1 like 1 pseudogene 2 2.3219 0.0014
9 ENSG00000278847 novel transcript 2.3219 0.0014
10 ENSG00000253327 RAD21-AS1 RAD21 antisense RNA 1 2.1610 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000164616 FBXL21P F-box and leucine rich repeat protein 21, pseudogene -1.9202 0.0000
63340 ENSG00000175229 GAL3ST3 galactose-3-O-sulfotransferase 3 -1.9199 0.0000
63339 ENSG00000110811 P3H3 prolyl 3-hydroxylase 3 -1.9197 0.0000
63338 ENSG00000118508 RAB32 RAB32, member RAS oncogene family -1.9196 0.0000
63337 ENSG00000284346 MIR940 microRNA 940 -1.9192 0.0000
63336 ENSG00000202474 RNA5SP283 RNA, 5S ribosomal pseudogene 283 -1.9192 0.0000
63335 ENSG00000236548 RNF217-AS1 RNF217 antisense RNA 1 (head to head) -1.9189 0.0000
63333 ENSG00000187984 ANKRD19P ankyrin repeat domain 19, pseudogene -1.9183 0.0000
63332 ENSG00000141570 CBX8 chromobox 8 -1.9182 0.0000
10 ENSG00000253327 RAD21-AS1 RAD21 antisense RNA 1 2.1610 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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