SHOGoiN Cell Methylome: GSM2773553

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773553


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M180Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000249994 novel transcript 3.0000 0.0000
2 ENSG00000242021 novel transcript 2.9769 0.0000
3 ENSG00000201423 RN7SKP246 RN7SK pseudogene 246 2.8873 0.0000
4 ENSG00000223152 RNU4-88P RNA, U4 small nuclear 88, pseudogene 2.8774 0.0000
5 ENSG00000175143 OR2T1 olfactory receptor family 2 subfamily T member 1 2.8074 0.0000
6 ENSG00000185903 OR11N1P olfactory receptor family 11 subfamily N member 1 pseudogene 2.8074 0.0000
7 ENSG00000221782 MIR548F2 microRNA 548f-2 2.8074 0.0000
8 ENSG00000242246 mitochondrially encoded ATP synthase 8 (MT-ATP8) pseudogene 2.8074 0.0000
9 ENSG00000265328 MIR548AB microRNA 548ab 2.8074 0.0000
10 ENSG00000270611 eukaryotic translation elongation factor 1 alpha 1, pseudogene 2.8074 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000160973 FOXH1 forkhead box H1 -2.4369 0.0000
63340 ENSG00000217128 FNIP1 folliculin interacting protein 1 -2.4368 0.0000
63339 ENSG00000242078 novel transcript -2.4361 0.0000
63338 ENSG00000183628 DGCR6 DiGeorge syndrome critical region gene 6 -2.4355 0.0000
63337 ENSG00000235875 ARHGEF7-AS2 ARHGEF7 antisense RNA 2 -2.4355 0.0000
63336 ENSG00000284481 MIR1292 microRNA 1292 -2.4351 0.0000
63335 ENSG00000148680 HTR7 5-hydroxytryptamine receptor 7 -2.4349 0.0000
63334 ENSG00000154640 BTG3 BTG anti-proliferation factor 3 -2.4344 0.0000
63333 ENSG00000225138 SLC9A3-AS1 SLC9A3 antisense RNA 1 -2.4340 0.0000
63332 ENSG00000140988 RPS2 ribosomal protein S2 -2.4340 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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