SHOGoiN Cell Methylome: GSM2773553
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM2773553 Profile download | 7010000000000000000000-773 | Sequence Read Archive | SRP074598 | SRP074598_M180 | Single-cell DNA methylome sequencing of human preimplantation embryos | Methylome | Morula | Human | Early embryonic tissue | Bisulfite-Seq (PBAT) | HiSeq 2500 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSG00000249994 | novel transcript | 3.0000 | 0.0000 | |
| 2 | ENSG00000242021 | novel transcript | 2.9769 | 0.0000 | |
| 3 | ENSG00000201423 | RN7SKP246 | RN7SK pseudogene 246 | 2.8873 | 0.0000 |
| 4 | ENSG00000223152 | RNU4-88P | RNA, U4 small nuclear 88, pseudogene | 2.8774 | 0.0000 |
| 5 | ENSG00000175143 | OR2T1 | olfactory receptor family 2 subfamily T member 1 | 2.8074 | 0.0000 |
| 6 | ENSG00000185903 | OR11N1P | olfactory receptor family 11 subfamily N member 1 pseudogene | 2.8074 | 0.0000 |
| 7 | ENSG00000221782 | MIR548F2 | microRNA 548f-2 | 2.8074 | 0.0000 |
| 8 | ENSG00000242246 | mitochondrially encoded ATP synthase 8 (MT-ATP8) pseudogene | 2.8074 | 0.0000 | |
| 9 | ENSG00000265328 | MIR548AB | microRNA 548ab | 2.8074 | 0.0000 |
| 10 | ENSG00000270611 | eukaryotic translation elongation factor 1 alpha 1, pseudogene | 2.8074 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 63341 | ENSG00000160973 | FOXH1 | forkhead box H1 | -2.4369 | 0.0000 |
| 63340 | ENSG00000217128 | FNIP1 | folliculin interacting protein 1 | -2.4368 | 0.0000 |
| 63339 | ENSG00000242078 | novel transcript | -2.4361 | 0.0000 | |
| 63338 | ENSG00000183628 | DGCR6 | DiGeorge syndrome critical region gene 6 | -2.4355 | 0.0000 |
| 63337 | ENSG00000235875 | ARHGEF7-AS2 | ARHGEF7 antisense RNA 2 | -2.4355 | 0.0000 |
| 63336 | ENSG00000284481 | MIR1292 | microRNA 1292 | -2.4351 | 0.0000 |
| 63335 | ENSG00000148680 | HTR7 | 5-hydroxytryptamine receptor 7 | -2.4349 | 0.0000 |
| 63334 | ENSG00000154640 | BTG3 | BTG anti-proliferation factor 3 | -2.4344 | 0.0000 |
| 63333 | ENSG00000225138 | SLC9A3-AS1 | SLC9A3 antisense RNA 1 | -2.4340 | 0.0000 |
| 63332 | ENSG00000140988 | RPS2 | ribosomal protein S2 | -2.4340 | 0.0000 |
