SHOGoiN Cell Methylome: GSM2773554

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773554


Profile download
7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M181Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000270976 ubiquitin C (UBC) pseudogene 3.0222 0.0000
2 ENSG00000222042 novel transcript 3.0000 0.0000
3 ENSG00000254677 OSBPL9P2 oxysterol binding protein like 9 pseudogene 2 2.8074 0.0000
4 ENSG00000255070 OSBPL9P3 oxysterol binding protein like 9 pseudogene 3 2.8074 0.0000
5 ENSG00000147003 CLTRN collectrin, amino acid transport regulator 2.6025 0.0000
6 ENSG00000198416 ZNF658B zinc finger protein 658B (pseudogene) 2.5850 0.0002
7 ENSG00000248191 PES1P1 pescadillo ribosomal biogenesis factor 1 pseudogene 1 2.5850 0.0002
8 ENSG00000227694 RPL23AP74 ribosomal protein L23a pseudogene 74 2.4818 0.0000
9 ENSG00000267207 novel transcript, antisense to BCAS3 2.4818 0.0000
10 ENSG00000267449 novel transcript, antisense to BCAS3 2.4818 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000245105 A2M-AS1 A2M antisense RNA 1 -2.1899 0.0000
63340 ENSG00000221081 MIR320D2 microRNA 320d-2 -2.1887 0.0023
63339 ENSG00000162981 LRATD1 LRAT domain containing 1 -2.1886 0.0000
63338 ENSG00000226124 FTCDNL1 formiminotransferase cyclodeaminase N-terminal like -2.1884 0.0000
63337 ENSG00000129465 RIPK3 receptor interacting serine/threonine kinase 3 -2.1879 0.0000
63336 ENSG00000284284 MIR4712 microRNA 4712 -2.1870 0.0000
63335 ENSG00000259715 novel transcript -2.1870 0.0000
63334 ENSG00000259368 novel transcript, antisense to DISP2 -2.1864 0.0000
63333 ENSG00000260159 family with sequence similarity 108, member A1 (FAM108A1) pseudogene -2.1860 0.0000
63332 ENSG00000201184 RNU4-68P RNA, U4 small nuclear 68, pseudogene -2.1854 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...