SHOGoiN Cell Methylome: GSM2773558

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773558


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7010000000000000000000-773Sequence Read ArchiveSRP074598SRP074598_M185Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeMorulaHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000215284 novel pseudogene (HSPC177) 2.8074 0.0000
2 ENSG00000272990 novel transcript, antisense to KCNAB1 2.8074 0.0000
3 ENSG00000199879 RNU1-120P RNA, U1 small nuclear 120, pseudogene 2.5850 0.0000
4 ENSG00000214067 ribosomal protein L21 (RPL21) pseudogene 2.3219 0.0007
5 ENSG00000255860 folate receptor 3 (gamma) (FOLR3) pseudogene 2.3219 0.0007
7 ENSG00000277752 NA 2.3219 0.0007
8 ENSG00000232149 FERP1 FER tyrosine kinase pseudogene 1 2.2925 0.0000
9 ENSG00000226448 RPL7AP51 ribosomal protein L7a pseudogene 51 2.1768 0.0000
10 ENSG00000258930 tetratricopeptide repeat domain 7B (TTC7B) pseudogene 2.1510 0.0000
63332 ENSG00000255091 novel transcript -1.9607 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000259945 novel transcript, antisense to FAM65A -1.9631 0.0000
63340 ENSG00000224675 uncharacterized LOC100144595 -1.9628 0.1538
63339 ENSG00000272341 novel transcript -1.9625 0.0000
63338 ENSG00000079931 MOXD1 monooxygenase DBH like 1 -1.9620 0.0000
63337 ENSG00000183674 LINC00518 long intergenic non-protein coding RNA 518 -1.9617 0.0000
63336 ENSG00000188938 FAM120AOS family with sequence similarity 120A opposite strand -1.9615 0.0000
63335 ENSG00000171224 FAM241B family with sequence similarity 241 member B -1.9614 0.0000
63334 ENSG00000261444 MPV17 mitochondrial membrane protein-like (MPV17L) pseudogene -1.9611 0.0000
63333 ENSG00000271993 novel transcript, antisense to LRRFIP2 -1.9608 0.0000
63332 ENSG00000255091 novel transcript -1.9607 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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