SHOGoiN Cell Methylome: GSM2773576

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773576


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP074598SRP074598_M203Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeICMHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000280317 TEC 2.5850 0.0000
2 ENSG00000231646 FSIP2-AS1 FSIP2 antisense RNA 1 2.3219 0.0004
3 ENSG00000237135 DDX10P1 DEAD-box helicase 10 pseudogene 1 2.3219 0.0004
4 ENSG00000238529 RNU6-599P RNA, U6 small nuclear 599, pseudogene 2.3219 0.0000
5 ENSG00000249936 RAC1P2 Rac family small GTPase 1 pseudogene 2 2.3219 0.0000
6 ENSG00000253078 RNU6-1116P RNA, U6 small nuclear 1116, pseudogene 2.3219 0.0000
7 ENSG00000272632 novel transcript 2.3219 0.0004
8 ENSG00000277306 NA 2.3219 0.0004
9 ENSG00000253532 novel transcript 2.2146 0.0000
10 ENSG00000259411 HNRNPA1P45 heterogeneous nuclear ribonucleoprotein A1 pseudogene 45 2.2034 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000185338 SOCS1 suppressor of cytokine signaling 1 -2.1538 0.0000
63340 ENSG00000197355 UAP1L1 UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 -2.1529 0.0000
63339 ENSG00000282907 novel transcript -2.1526 0.0000
63338 ENSG00000157557 ETS2 ETS proto-oncogene 2, transcription factor -2.1519 0.0000
63337 ENSG00000231261 HMGN2P10 high mobility group nucleosomal binding domain 2 pseudogene10 -2.1510 0.0000
63336 ENSG00000267296 CEBPA-DT CEBPA divergent transcript -2.1510 0.0000
63335 ENSG00000266605 LONRF2P1 LON peptidase N-terminal domain and ring finger 2 pseudogene 1 -2.1500 0.0000
63334 ENSG00000272969 novel transcript, antisense to clock -2.1500 0.0000
63333 ENSG00000108960 MMD monocyte to macrophage differentiation associated -2.1498 0.0000
63332 ENSG00000184811 TRARG1 trafficking regulator of GLUT4 (SLC2A4) 1 -2.1494 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...