SHOGoiN Cell Methylome: GSM2773585

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773585


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP074598SRP074598_M212Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeICMHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000279342 novel transcript, sense intronic to MSANTD2 3.3219 0.0000
2 ENSG00000276810 ribosomal protein L18a (RPL18A) pseudogene 2.8074 0.0000
3 ENSG00000264232 LINC01916 long intergenic non-protein coding RNA 1916 2.5850 0.0001
4 ENSG00000168131 OR2B2 olfactory receptor family 2 subfamily B member 2 2.4842 0.0000
5 ENSG00000233605 LINC01851 long intergenic non-protein coding RNA 1851 2.3219 0.0000
6 ENSG00000239941 novel transcript 2.3219 0.0000
7 ENSG00000249052 novel transcript 2.3219 0.0005
8 ENSG00000258505 leucine-rich pentatricopeptide repeat containing (LRPPRC) pseudogene 2.3219 0.0005
10 ENSG00000197023 OR51A6P olfactory receptor family 51 subfamily A member 6 pseudogene 2.2034 0.0000
63332 ENSG00000203497 PDCD4-AS1 PDCD4 antisense RNA 1 -2.2134 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000155463 OXA1L OXA1L mitochondrial inner membrane protein -2.2169 0.0000
63340 ENSG00000266066 POLRMTP1 RNA polymerase mitochondrial pseudogene 1 -2.2167 0.0000
63339 ENSG00000107789 MINPP1 multiple inositol-polyphosphate phosphatase 1 -2.2167 0.0000
63338 ENSG00000264553 MIR4257 microRNA 4257 -2.2163 0.0000
63337 ENSG00000243959 RN7SL684P RNA, 7SL, cytoplasmic 684, pseudogene -2.2161 0.0000
63336 ENSG00000108107 RPL28 ribosomal protein L28 -2.2160 0.0000
63335 ENSG00000267634 RPL7L1P5 ribosomal protein L7 like 1 pseudogene 5 -2.2156 0.0000
63334 ENSG00000135469 COQ10A coenzyme Q10A -2.2150 0.0000
63333 ENSG00000253882 family with sequence similarity 115, member C (FAM115C) pseudogene -2.2138 0.0000
63332 ENSG00000203497 PDCD4-AS1 PDCD4 antisense RNA 1 -2.2134 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...