SHOGoiN Cell Methylome: GSM2773591

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773591


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP074598SRP074598_M218Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeICMHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000237663 DNAJC19P7 DnaJ heat shock protein family (Hsp40) member C19 pseudogene 7 3.3219 0.0000
2 ENSG00000221545 MIR1255B2 microRNA 1255b-2 3.0000 0.0000
3 ENSG00000235133 RPL35AP22 ribosomal protein L35a pseudogene 22 3.0000 0.0000
4 ENSG00000090104 RGS1 regulator of G protein signaling 1 2.8074 0.0000
5 ENSG00000214073 RPL21P17 ribosomal protein L21 pseudogene 17 2.8074 0.0000
6 ENSG00000233994 GDI2P2 GDP dissociation inhibitor 2 pseudogene 2 2.8074 0.0000
7 ENSG00000256285 OSBPL9P5 oxysterol binding protein like 9 pseudogene 5 2.8074 0.0000
8 ENSG00000265885 RN7SL783P RNA, 7SL, cytoplasmic 783, pseudogene 2.7740 0.0000
9 ENSG00000278206 novel transcript 2.6962 0.0000
10 ENSG00000271793 novel protein, SYNCRIP-SNX14 readthrough 2.6923 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000234965 SHISA8 shisa family member 8 -2.5345 0.0000
63340 ENSG00000100077 GRK3 G protein-coupled receptor kinase 3 -2.5333 0.0000
63339 ENSG00000250825 PGAM1P12 phosphoglycerate mutase 1 pseudogene 12 -2.5331 0.0031
63338 ENSG00000165617 DACT1 dishevelled binding antagonist of beta catenin 1 -2.5308 0.0000
63337 ENSG00000099849 RASSF7 Ras association domain family member 7 -2.5301 0.0000
63336 ENSG00000180543 TSPYL5 TSPY like 5 -2.5296 0.0000
63335 ENSG00000236200 KDM4A-AS1 KDM4A antisense RNA 1 -2.5294 0.0000
63334 ENSG00000114315 HES1 hes family bHLH transcription factor 1 -2.5292 0.0000
63333 ENSG00000230649 novel transcript -2.5283 0.1528
63332 ENSG00000199593 SNORD114-14 small nucleolar RNA, C/D box 114-14 -2.5283 0.0981

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...