SHOGoiN Cell Methylome: GSM2773593
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM2773593 Profile download | 7020001000000000000000-715 | Sequence Read Archive | SRP074598 | SRP074598_M220 | Single-cell DNA methylome sequencing of human preimplantation embryos | Methylome | ICM | Human | Early embryonic tissue | Bisulfite-Seq (PBAT) | HiSeq 2500 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 2 | ENSG00000249837 | novel transcript | 3.0000 | 0.0000 | |
| 4 | ENSG00000236958 | novel transcript | 2.8074 | 0.0000 | |
| 5 | ENSG00000242068 | ring finger protein 13 (RNF13) pseudogene | 2.8074 | 0.0000 | |
| 6 | ENSG00000249568 | novel transcript | 2.8074 | 0.0000 | |
| 7 | ENSG00000251816 | RNA5SP157 | RNA, 5S ribosomal pseudogene 157 | 2.8074 | 0.0000 |
| 8 | ENSG00000259032 | ENSAP2 | endosulfine alpha pseudogene 2 | 2.8074 | 0.0000 |
| 9 | ENSG00000267627 | novel transcript | 2.8074 | 0.0000 | |
| 10 | ENSG00000274631 | IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) (IMMP1L) pseudogene | 2.8074 | 0.0000 | |
| 63332 | ENSG00000153485 | TMEM251 | transmembrane protein 251 | -2.1081 | 0.0000 |
| 63333 | ENSG00000165943 | MOAP1 | modulator of apoptosis 1 | -2.1081 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 63341 | ENSG00000264271 | RN7SL488P | RNA, 7SL, cytoplasmic 488, pseudogene | -2.1107 | 0.0034 |
| 63340 | ENSG00000231359 | ribosomal protein L31 (RPL31) pseudogene | -2.1106 | 0.0000 | |
| 63339 | ENSG00000174586 | ZNF497 | zinc finger protein 497 | -2.1103 | 0.0000 |
| 63338 | ENSG00000226676 | LINC02679 | long intergenic non-protein coding RNA 2679 | -2.1101 | 0.2543 |
| 63337 | ENSG00000264585 | MIR4449 | microRNA 4449 | -2.1098 | 0.0000 |
| 63336 | ENSG00000139684 | ESD | esterase D | -2.1094 | 0.0002 |
| 63335 | ENSG00000152315 | KCNK13 | potassium two pore domain channel subfamily K member 13 | -2.1088 | 0.0000 |
| 63334 | ENSG00000259066 | novel protein | -2.1081 | 0.0000 | |
| 63333 | ENSG00000165943 | MOAP1 | modulator of apoptosis 1 | -2.1081 | 0.0000 |
| 63332 | ENSG00000153485 | TMEM251 | transmembrane protein 251 | -2.1081 | 0.0000 |
