SHOGoiN Cell Methylome: GSM2773593

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773593


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7020001000000000000000-715Sequence Read ArchiveSRP074598SRP074598_M220Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeICMHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
2 ENSG00000249837 novel transcript 3.0000 0.0000
4 ENSG00000236958 novel transcript 2.8074 0.0000
5 ENSG00000242068 ring finger protein 13 (RNF13) pseudogene 2.8074 0.0000
6 ENSG00000249568 novel transcript 2.8074 0.0000
7 ENSG00000251816 RNA5SP157 RNA, 5S ribosomal pseudogene 157 2.8074 0.0000
8 ENSG00000259032 ENSAP2 endosulfine alpha pseudogene 2 2.8074 0.0000
9 ENSG00000267627 novel transcript 2.8074 0.0000
10 ENSG00000274631 IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) (IMMP1L) pseudogene 2.8074 0.0000
63332 ENSG00000153485 TMEM251 transmembrane protein 251 -2.1081 0.0000
63333 ENSG00000165943 MOAP1 modulator of apoptosis 1 -2.1081 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000264271 RN7SL488P RNA, 7SL, cytoplasmic 488, pseudogene -2.1107 0.0034
63340 ENSG00000231359 ribosomal protein L31 (RPL31) pseudogene -2.1106 0.0000
63339 ENSG00000174586 ZNF497 zinc finger protein 497 -2.1103 0.0000
63338 ENSG00000226676 LINC02679 long intergenic non-protein coding RNA 2679 -2.1101 0.2543
63337 ENSG00000264585 MIR4449 microRNA 4449 -2.1098 0.0000
63336 ENSG00000139684 ESD esterase D -2.1094 0.0002
63335 ENSG00000152315 KCNK13 potassium two pore domain channel subfamily K member 13 -2.1088 0.0000
63334 ENSG00000259066 novel protein -2.1081 0.0000
63333 ENSG00000165943 MOAP1 modulator of apoptosis 1 -2.1081 0.0000
63332 ENSG00000153485 TMEM251 transmembrane protein 251 -2.1081 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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