SHOGoiN Cell Methylome: GSM2773616

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773616


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7020001000000000000000-715Sequence Read ArchiveSRP074598SRP074598_M243Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeICMHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
2 ENSG00000243025 MTAPP1 methylthioadenosine phosphorylase pseudogene 1 2.0000 0.0024
3 ENSG00000252864 RNA5SP278 RNA, 5S ribosomal pseudogene 278 2.0000 0.0000
4 ENSG00000212259 RNU6-308P RNA, U6 small nuclear 308, pseudogene 1.8617 0.0000
5 ENSG00000259032 ENSAP2 endosulfine alpha pseudogene 2 1.8000 0.0000
6 ENSG00000226414 MTCYBP38 MT-CYB pseudogene 38 1.7890 0.0000
7 ENSG00000279698 TEC 1.6667 0.0000
8 ENSG00000265425 novel transcript 1.6610 0.0000
9 ENSG00000231822 structural maintenance of chromosomes 3 (SMC3) pseudogene 1.6462 0.0000
10 ENSG00000243122 ribosomal protein S15 (RPS15) pseudogene 1.5975 0.0000
63332 ENSG00000178163 ZNF518B zinc finger protein 518B -1.9002 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000203727 SAMD5 sterile alpha motif domain containing 5 -1.9040 0.0000
63340 ENSG00000279725 TEC -1.9035 0.0000
63339 ENSG00000267414 uncharacterized LOC101927943 -1.9028 0.0000
63338 ENSG00000156427 FGF18 fibroblast growth factor 18 -1.9025 0.0000
63337 ENSG00000188778 ADRB3 adrenoceptor beta 3 -1.9022 0.0000
63336 ENSG00000231918 novel transcript -1.9018 0.0000
63335 ENSG00000233451 novel transcript, sense overlapping SPAG6 -1.9008 0.0984
63334 ENSG00000166573 GALR1 galanin receptor 1 -1.9008 0.0000
63333 ENSG00000277693 novel transcript -1.9007 0.0000
63332 ENSG00000178163 ZNF518B zinc finger protein 518B -1.9002 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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