SHOGoiN Cell Methylome: GSM2773658

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773658


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP074598SRP074598_M285Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeICMHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000212187 NA 2.8074 0.0000
2 ENSG00000270759 oocyte expressed protein (OOEP) pseudogene 2.7416 0.0000
3 ENSG00000201744 RNU6-34P RNA, U6 small nuclear 34, pseudogene 2.5850 0.0002
4 ENSG00000207632 MIR588 microRNA 588 2.5850 0.0002
5 ENSG00000228519 RAN binding protein 1 pseudogene 2.5204 0.0000
6 ENSG00000186943 OR13C8 olfactory receptor family 13 subfamily C member 8 2.5192 0.0000
7 ENSG00000251735 NA 2.3949 0.0000
8 ENSG00000212321 NA 2.3219 0.0011
9 ENSG00000231388 formin 2 (FMN2) pseudogene 2.3219 0.0011
10 ENSG00000239205 LINC02023 long intergenic non-protein coding RNA 2023 2.3219 0.0011

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000182747 SLC35D3 solute carrier family 35 member D3 -2.2096 0.0000
63340 ENSG00000282842 FRG2EP FSHD region gene 2 family member E, pseudogene -2.2095 0.0000
63339 ENSG00000184221 OLIG1 oligodendrocyte transcription factor 1 -2.2095 0.0000
63338 ENSG00000169006 NTSR2 neurotensin receptor 2 -2.2094 0.0000
63337 ENSG00000185252 ZNF74 zinc finger protein 74 -2.2092 0.0000
63336 ENSG00000243766 HOTTIP HOXA distal transcript antisense RNA -2.2088 0.0000
63335 ENSG00000256825 novel protein -2.2069 0.0000
63334 ENSG00000198569 SLC34A3 solute carrier family 34 member 3 -2.2057 0.0000
63333 ENSG00000229262 novel transcript -2.2056 0.0000
63332 ENSG00000236896 novel transcript -2.2055 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...