SHOGoiN Cell Methylome: GSM2773659

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773659


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7020001000000000000000-715Sequence Read ArchiveSRP074598SRP074598_M286Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeICMHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000212187 NA 3.3219 0.0000
2 ENSG00000237873 discs, large homolog 7 (Drosophila) (DLG7) pseudogene 2.9886 0.0000
3 ENSG00000152931 PART1 prostate androgen-regulated transcript 1 2.8074 0.0000
4 ENSG00000224471 MTCO3P19 MT-CO3 pseudogene 19 2.8074 0.0000
5 ENSG00000226056 MTND4P32 MT-ND4 pseudogene 32 2.8074 0.0000
6 ENSG00000228316 MTATP6P19 MT-ATP6 pseudogene 19 2.8074 0.0000
7 ENSG00000232035 novel transcript 2.8074 0.0000
8 ENSG00000234886 MTND5P26 MT-ND5 pseudogene 26 2.8074 0.0000
9 ENSG00000237628 MTCO2P19 MT-CO2 pseudogene 19 2.8074 0.0000
10 ENSG00000273701 NA 2.8074 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000207639 MIR193B microRNA 193b -2.2962 0.0000
63340 ENSG00000267131 novel transcript, antisense to BCAS3 -2.2961 0.0000
63339 ENSG00000130810 PPAN peter pan homolog -2.2961 0.0000
63338 ENSG00000235421 novel pseudogene similar to part of integrator complex subunit 4 INTS4 -2.2960 0.0000
63337 ENSG00000229915 novel transcript -2.2955 0.0000
63336 ENSG00000099625 CBARP CACN subunit beta associated regulatory protein -2.2945 0.0000
63335 ENSG00000270828 novel transcript -2.2944 0.0000
63334 ENSG00000259515 novel transcript, antisense to CDC42BPB -2.2932 0.0000
63333 ENSG00000175087 PDIK1L PDLIM1 interacting kinase 1 like -2.2930 0.0000
63332 ENSG00000260282 EIF4EBP2P2 eukaryotic translation initiation factor 4E binding protein 2 pseudogene 2 -2.2930 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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