SHOGoiN Cell Methylome: GSM2773663

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773663


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7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M290Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000255477 novel transcript 3.4594 0.0000
2 ENSG00000249847 novel transcript 3.1699 0.0000
3 ENSG00000198523 PLN phospholamban 2.5850 0.0000
4 ENSG00000212611 NA 2.5850 0.0000
5 ENSG00000219284 novel pseudogene 2.5850 0.0000
6 ENSG00000277797 novel transcript 2.5850 0.0000
7 ENSG00000278011 novel transcript 2.5000 0.0000
8 ENSG00000254919 novel transcript 2.4387 0.0000
9 ENSG00000257302 FAHD2P1 fumarylacetoacetate hydrolase domain containing 2 pseudogene 1 2.4175 0.0000
10 ENSG00000182365 OR5F2P olfactory receptor family 5 subfamily F member 2 pseudogene 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000124227 ANKRD60 ankyrin repeat domain 60 -2.0156 0.0000
63340 ENSG00000200632 SNORD113-7 small nucleolar RNA, C/D box 113-7 -2.0154 0.0194
63339 ENSG00000200215 SNORD113-6 small nucleolar RNA, C/D box 113-6 -2.0154 0.0194
63338 ENSG00000238290 novel transcript -2.0152 0.0000
63337 ENSG00000171551 ECEL1 endothelin converting enzyme like 1 -2.0148 0.0000
63336 ENSG00000188859 FAM78B family with sequence similarity 78 member B -2.0146 0.0000
63335 ENSG00000228950 novel transcript -2.0145 0.0000
63334 ENSG00000199104 MIR346 microRNA 346 -2.0143 0.0000
63333 ENSG00000228716 DHFR dihydrofolate reductase -2.0138 0.0000
63332 ENSG00000106511 MEOX2 mesenchyme homeobox 2 -2.0138 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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