Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773663

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2773663 Profile download	7020007000000000000000-780	Sequence Read Archive	SRP074598	SRP074598_M290	Single-cell DNA methylome sequencing of human preimplantation embryos	Methylome	TE	Human	Early embryonic tissue	Bisulfite-Seq (PBAT)	HiSeq 2500	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSG00000255477		novel transcript	3.4594	0.0000
2	ENSG00000249847		novel transcript	3.1699	0.0000
3	ENSG00000198523	PLN	phospholamban	2.5850	0.0000
4	ENSG00000212611		Small nucleolar RNA SNORD30	2.5850	0.0000
5	ENSG00000219284		novel pseudogene	2.5850	0.0000
6	ENSG00000277797		novel transcript	2.5850	0.0000
7	ENSG00000278011		novel transcript	2.5000	0.0000
8	ENSG00000254919		novel transcript	2.4387	0.0000
9	ENSG00000257302	FAHD2P1	fumarylacetoacetate hydrolase domain containing 2 pseudogene 1	2.4175	0.0000
10	ENSG00000182365	OR5F2P	olfactory receptor family 5 subfamily F member 2 pseudogene	2.3219	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
63128	ENSG00000275836	MIR6068	microRNA 6068	-1.9807	0.0000
63127	ENSG00000140557	ST8SIA2	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	-1.9805	0.0000
63126	ENSG00000064547	LPAR2	lysophosphatidic acid receptor 2	-1.9805	0.0000
63125	ENSG00000277469		NA	-1.9797	0.0000
63124	ENSG00000145632	PLK2	polo like kinase 2	-1.9796	0.0000
63123	ENSG00000224640	SRSF1P1	serine and arginine rich splicing factor 1 pseudogene 1	-1.9788	0.1572
63122	ENSG00000224914	LINC00863	long intergenic non-protein coding RNA 863	-1.9788	0.0000
63121	ENSG00000101278	RPS10P5	ribosomal protein S10 pseudogene 5	-1.9787	0.0000
63120	ENSG00000102125	TAZ	tafazzin	-1.9783	0.0000
63119	ENSG00000113763	UNC5A	unc-5 netrin receptor A	-1.9774	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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