SHOGoiN Cell Methylome: GSM2773672

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773672


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7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M299Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000249091 novel transcript 2.8074 0.0000
2 ENSG00000203661 OR2T5 olfactory receptor family 2 subfamily T member 5 2.5850 0.0000
3 ENSG00000226461 OR10G5P olfactory receptor family 10 subfamily G member 5 pseudogene 2.5850 0.0002
4 ENSG00000229255 novel transcript 2.5850 0.0000
5 ENSG00000232293 PAICSP7 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 7 2.5850 0.0002
6 ENSG00000236085 ACTG1P4 actin gamma 1 pseudogene 4 2.5850 0.0000
7 ENSG00000238386 RNU7-48P RNA, U7 small nuclear 48 pseudogene 2.5850 0.0002
8 ENSG00000240095 novel transcript 2.5850 0.0000
9 ENSG00000250839 mitochondrially encoded cytochrome c oxidase II (MT-CO2) pseudogene 2.5850 0.0002
10 ENSG00000253717 novel transcript 2.4973 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000235042 novel transcript -2.0321 0.0000
63340 ENSG00000171533 MAP6 microtubule associated protein 6 -2.0320 0.0000
63339 ENSG00000236668 novel transcript, antisense to LHX2 -2.0319 0.0000
63338 ENSG00000157870 PRXL2B peroxiredoxin like 2B -2.0310 0.0000
63337 ENSG00000235821 IFITM4P interferon induced transmembrane protein 4 pseudogene -2.0309 0.0000
63336 ENSG00000273091 novel transcript -2.0299 0.0000
63335 ENSG00000261120 novel transcript, antisense to LRRC9 -2.0296 0.0000
63334 ENSG00000248767 novel forkhead box family protein -2.0292 0.0000
63333 ENSG00000278907 novel transcript, antisense to PCDHA9 -2.0287 0.0000
63332 ENSG00000260618 novel transcript, antisense to KIAA1370 -2.0285 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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