Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773672

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773672


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7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M299Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000249091 novel transcript 2.8074 0.0000
2 ENSG00000203661 OR2T5 olfactory receptor family 2 subfamily T member 5 2.5850 0.0000
3 ENSG00000226461 OR10G5P olfactory receptor family 10 subfamily G member 5 pseudogene 2.5850 0.0002
4 ENSG00000229255 novel transcript 2.5850 0.0000
5 ENSG00000232293 PAICSP7 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 7 2.5850 0.0002
6 ENSG00000236085 ACTG1P4 actin gamma 1 pseudogene 4 2.5850 0.0000
7 ENSG00000238386 RNU7-48P RNA, U7 small nuclear 48 pseudogene 2.5850 0.0002
8 ENSG00000240095 novel transcript 2.5850 0.0000
9 ENSG00000250839 mitochondrially encoded cytochrome c oxidase II (MT-CO2) pseudogene 2.5850 0.0002
10 ENSG00000253717 novel transcript 2.4973 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63128 ENSG00000250685 novel transcript, antisense to ADAD2 -1.9793 0.0000
63127 ENSG00000136490 LIMD2 LIM domain containing 2 -1.9790 0.0000
63126 ENSG00000282860 novel transcript -1.9789 0.0000
63125 ENSG00000252892 RNU6-548P RNA, U6 small nuclear 548, pseudogene -1.9786 0.0000
63124 ENSG00000146802 TMEM168 transmembrane protein 168 -1.9783 0.0000
63123 ENSG00000132286 TIMM10B translocase of inner mitochondrial membrane 10B -1.9782 0.0000
63122 ENSG00000231992 novel transcript -1.9780 0.0000
63121 ENSG00000196660 SLC30A10 solute carrier family 30 member 10 -1.9779 0.0000
63120 ENSG00000278932 novel transcript -1.9779 0.0000
63119 ENSG00000233621 LINC01137 long intergenic non-protein coding RNA 1137 -1.9776 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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