Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773681

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2773681 Profile download	7020007000000000000000-780	Sequence Read Archive	SRP074598	SRP074598_M308	Single-cell DNA methylome sequencing of human preimplantation embryos	Methylome	TE	Human	Early embryonic tissue	Bisulfite-Seq (PBAT)	HiSeq 2500	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSG00000130538	OR11H1	olfactory receptor family 11 subfamily H member 1	3.4594	0.0000
2	ENSG00000231388	FMN2P1	FMN2 pseudogene 1	3.4594	0.0000
3	ENSG00000242121	RN7SL267P	RNA, 7SL, cytoplasmic 267, pseudogene	3.4594	0.0000
4	ENSG00000249065	PCNAP1	proliferating cell nuclear antigen pseudogene 1	3.3219	0.0000
5	ENSG00000174325	DIRC1	disrupted in renal carcinoma 1	3.1699	0.0000
6	ENSG00000258506		ribosomal protein L13a (RPL13A) pseudogene	3.1699	0.0000
7	ENSG00000264705		novel transcript	3.1699	0.0000
8	ENSG00000260975		novel transcript	3.1144	0.0000
9	ENSG00000232458	LINC01450	long intergenic non-protein coding RNA 1450	3.0000	0.0000
10	ENSG00000272316		novel transcript	3.0000	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
63128	ENSG00000176798	OR51L1	olfactory receptor family 51 subfamily L member 1	-2.4387	0.0578
63127	ENSG00000270542		heat-responsive protein 12 (HRSP12) pseudogene	-2.4382	0.0000
63126	ENSG00000146215	CRIP3	cysteine rich protein 3	-2.4377	0.0000
63125	ENSG00000259075	POC1B-GALNT4	POC1B-GALNT4 readthrough	-2.4365	0.0000
63124	ENSG00000164972	C9orf24	chromosome 9 open reading frame 24	-2.4364	0.0000
63123	ENSG00000261044		novel transcript, antisense to ARC	-2.4362	0.0000
63122	ENSG00000239967	OR2A41P	olfactory receptor family 2 subfamily A member 41 pseudogene	-2.4361	0.0004
63121	ENSG00000235016	SEMA3F-AS1	SEMA3F antisense RNA 1	-2.4359	0.0000
63120	ENSG00000135736	CCDC102A	coiled-coil domain containing 102A	-2.4349	0.0000
63119	ENSG00000267695		novel transcript	-2.4347	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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