SHOGoiN Cell Methylome: GSM2773681

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773681


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7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M308Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000130538 OR11H1 olfactory receptor family 11 subfamily H member 1 3.4594 0.0000
2 ENSG00000231388 formin 2 (FMN2) pseudogene 3.4594 0.0000
3 ENSG00000242121 RN7SL267P RNA, 7SL, cytoplasmic 267, pseudogene 3.4594 0.0000
4 ENSG00000249065 PCNAP1 proliferating cell nuclear antigen pseudogene 1 3.3219 0.0000
5 ENSG00000174325 DIRC1 disrupted in renal carcinoma 1 3.1699 0.0000
6 ENSG00000258506 ribosomal protein L13a (RPL13A) pseudogene 3.1699 0.0000
7 ENSG00000264705 novel transcript 3.1699 0.0000
8 ENSG00000260975 novel transcript 3.1144 0.0000
9 ENSG00000232458 LINC01450 long intergenic non-protein coding RNA 1450 3.0000 0.0000
10 ENSG00000272316 novel transcript 3.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000178980 SELENOW selenoprotein W -2.5301 0.0000
63340 ENSG00000251604 LINC01385 long intergenic non-protein coding RNA 1385 -2.5298 0.0000
63339 ENSG00000222303 RNU6-935P RNA, U6 small nuclear 935, pseudogene -2.5291 0.0000
63338 ENSG00000072849 DERL2 derlin 2 -2.5285 0.0000
63337 ENSG00000272265 novel transcript -2.5283 0.0039
63336 ENSG00000259993 hyperpolarization activated cyclic nucleotide-gated potassium channel 2 (HCN2) pseudogene -2.5283 0.0925
63335 ENSG00000156096 UGT2B4 UDP glucuronosyltransferase family 2 member B4 -2.5283 0.0039
63334 ENSG00000138400 MDH1B malate dehydrogenase 1B -2.5283 0.0925
63333 ENSG00000274718 novel transcript -2.5282 0.0000
63332 ENSG00000184160 ADRA2C adrenoceptor alpha 2C -2.5274 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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