SHOGoiN Cell Methylome: GSM2773683

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773683


Profile download
7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M310Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000199878 RN7SKP149 RN7SK pseudogene 149 3.2297 0.0000
2 ENSG00000109163 GNRHR gonadotropin releasing hormone receptor 3.1699 0.0000
3 ENSG00000222713 RN7SKP51 RN7SK pseudogene 51 3.1699 0.0000
4 ENSG00000257545 novel transcript, antisense to POLR3B, RFX4 and RIC8B. 3.0373 0.0000
5 ENSG00000224799 novel transcript 3.0000 0.0000
6 ENSG00000248745 NMNAT1P4 NMNAT1 pseudogene 4 3.0000 0.0000
7 ENSG00000251172 pseudogene similar to part of transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 (TPTE2) 3.0000 0.0000
8 ENSG00000272354 novel transcript 3.0000 0.0000
9 ENSG00000272370 novel transcript 3.0000 0.0000
10 ENSG00000276578 sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1 (SULT2A1) pseudogene 3.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000198205 ZXDA zinc finger X-linked duplicated A -2.3567 0.0000
63339 ENSG00000241652 RN7SL253P RNA, 7SL, cytoplasmic 253, pseudogene -2.3560 0.0006
63338 ENSG00000255605 novel transcript -2.3560 0.0023
63337 ENSG00000182574 chondroitin beta1,4 N-acetylgalactosaminyltransferase (ChGn) pseudogene -2.3560 0.0093
63336 ENSG00000225136 PGBD4P5 piggyBac transposable element derived 4 pseudogene 5 -2.3558 0.0000
63335 ENSG00000196266 OR10J3 olfactory receptor family 10 subfamily J member 3 -2.3555 0.0353
63334 ENSG00000280236 OR12D2 olfactory receptor family 12 subfamily D member 2 (gene/pseudogene) -2.3555 0.0000
63333 ENSG00000176230 OR4K17 olfactory receptor family 4 subfamily K member 17 -2.3546 0.0222
63332 ENSG00000206417 H1FX-AS1 H1FX antisense RNA 1 -2.3545 0.0000
10 ENSG00000276578 sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1 (SULT2A1) pseudogene 3.0000 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...