SHOGoiN Cell Methylome: GSM2773690

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773690


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7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M317Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000265735 RN7SL5P RNA, 7SL, cytoplasmic 5, pseudogene 2.3219 0.0000
2 ENSG00000200814 RNU6-595P RNA, U6 small nuclear 595, pseudogene 1.6443 0.0000
3 ENSG00000212620 NA 1.5850 0.0000
4 ENSG00000229208 RBMY2NP RNA binding motif protein, Y-linked, family 2, member N pseudogene 1.5850 0.0234
5 ENSG00000230968 novel transcript 1.5850 0.0005
6 ENSG00000259113 novel transcript 1.5850 0.0234
7 ENSG00000283476 MIR1279 microRNA 1279 1.5850 0.0234
8 ENSG00000271679 LSM1P2 LSM1 homolog, mRNA degradation associated pseudogene 2 1.4680 0.0000
9 ENSG00000176695 olfactory receptor family 4 subfamily F member 17 1.4387 0.0000
10 ENSG00000248363 novel transcript 1.3900 0.0001

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000173531 MST1 macrophage stimulating 1 -1.8506 0.0000
63340 ENSG00000272657 novel transcript -1.8504 0.0000
63339 ENSG00000264408 MIR4470 microRNA 4470 -1.8504 0.0000
63338 ENSG00000284574 MIR6787 microRNA 6787 -1.8503 0.0000
63337 ENSG00000268996 MAN1B1-DT MAN1B1 divergent transcript -1.8501 0.0000
63336 ENSG00000267004 novel transcript -1.8499 0.0000
63335 ENSG00000244242 IFITM10 interferon induced transmembrane protein 10 -1.8493 0.0000
63334 ENSG00000260231 KDM7A-DT KDM7A divergent transcript -1.8488 0.0000
63333 ENSG00000213310 CYCSP19 CYCS pseudogene 19 -1.8485 0.0000
63332 ENSG00000265800 novel transcript, sense intronic to HN1 -1.8480 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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