Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773694

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773694


Profile download
7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M321Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000205328 OR6C65 olfactory receptor family 6 subfamily C member 65 3.1699 0.0000
2 ENSG00000257414 OR6C73P olfactory receptor family 6 subfamily C member 73 pseudogene 3.1699 0.0000
3 ENSG00000228959 novel transcript 3.0000 0.0000
4 ENSG00000208308 SNORA40B small nucleolar RNA, H/ACA box 40B 2.9358 0.0000
5 ENSG00000202125 RNU1-100P RNA, U1 small nuclear 100, pseudogene 2.5850 0.0000
6 ENSG00000223601 EBLN1 endogenous Bornavirus like nucleoprotein 1 2.5850 0.0000
7 ENSG00000238149 ribosomal protein S15a (RPS15A) pseudogene 2.5850 0.0000
8 ENSG00000241328 LINC02070 long intergenic non-protein coding RNA 2070 2.5850 0.0000
9 ENSG00000248363 novel transcript 2.5850 0.0000
10 ENSG00000250842 novel transcript 2.5850 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63128 ENSG00000207569 MIR433 microRNA 433 -2.1174 0.0000
63127 ENSG00000254574 novel transcript -2.1169 0.0000
63126 ENSG00000185215 TNFAIP2 TNF alpha induced protein 2 -2.1162 0.0000
63124 ENSG00000284583 MIR935 microRNA 935 -2.1158 0.0000
63123 ENSG00000136450 SRSF1 serine and arginine rich splicing factor 1 -2.1155 0.0000
63122 ENSG00000244952 novel transcript -2.1153 0.3127
63121 ENSG00000204718 CNN2P12 calponin 2 pseudogene 12 -2.1151 0.0000
63120 ENSG00000272836 novel transcript, antisense to SELO -2.1151 0.0000
63119 ENSG00000184897 H1-10 H1.10 linker histone -2.1149 0.0000
10 ENSG00000250842 novel transcript 2.5850 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...