SHOGoiN Cell Methylome: GSM2773703

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773703


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7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M330Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000184227 ACOT1 acyl-CoA thioesterase 1 3.1073 0.0000
2 ENSG00000249562 FERM domain containing 7 (FRMD7) pseudogene 2.5850 0.0000
3 ENSG00000224185 SNX18P9 sorting nexin 18 pseudogene 9 2.3999 0.0000
4 ENSG00000131808 FSHB follicle stimulating hormone subunit beta 2.3219 0.0000
5 ENSG00000223800 novel transcript 2.3219 0.0001
6 ENSG00000224827 LINC00265-2P long intergenic non-protein coding RNA 265-2, pseudogene 2.3219 0.0000
7 ENSG00000231255 novel transcript 2.3219 0.0001
8 ENSG00000252023 RNU6-581P RNA, U6 small nuclear 581, pseudogene 2.3219 0.0001
9 ENSG00000275071 NA 2.3219 0.0001
10 ENSG00000207632 MIR588 microRNA 588 2.0000 0.0013

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000252854 RN7SKP5 RN7SK pseudogene 5 -2.0000 0.6317
63340 ENSG00000252707 RNU11-2P RNA, U11 small nuclear 2, pseudogene -2.0000 0.6104
63339 ENSG00000251170 novel transcript -2.0000 1.0000
63338 ENSG00000251074 UDP glucuronosyltransferase 2 family pseudogene -2.0000 1.0000
63337 ENSG00000250640 OR7E41P olfactory receptor family 7 subfamily E member 41 pseudogene -2.0000 0.6104
63336 ENSG00000249698 MTCO3P9 MT-CO3 pseudogene 9 -2.0000 0.6317
63335 ENSG00000249678 novel transcript -2.0000 1.0000
63334 ENSG00000248574 ADAM20P2 ADAM metallopeptidase domain 20 pseudogene 2 -2.0000 1.0000
63333 ENSG00000248420 MTATP6P9 MT-ATP6 pseudogene 9 -2.0000 0.6317
63332 ENSG00000244674 RPS3AP15 ribosomal protein S3a pseudogene 15 -2.0000 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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