SHOGoiN Cell Methylome: GSM2773713

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773713


Profile download
7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M340Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000224599 BMS1P12 BMS1 pseudogene 12 2.5850 0.0000
2 ENSG00000224935 novel transcript 2.1610 0.0000
3 ENSG00000256564 novel transcript 2.0763 0.0000
4 ENSG00000234384 LINC01049 long intergenic non-protein coding RNA 1049 2.0000 0.0019
5 ENSG00000227138 pseudogene similar to part of ribosomal protein S3A RPS3A 1.6887 0.0000
6 ENSG00000249910 TRIM51CP tripartite motif-containing 51C, pseudogene 1.6610 0.0000
7 ENSG00000188993 LRRC66 leucine rich repeat containing 66 1.6473 0.0000
8 ENSG00000253523 novel transcript 1.6356 0.0000
9 ENSG00000180673 EXOC5P1 exocyst complex component 5 pseudogene 1 1.5850 0.0152
10 ENSG00000198967 OR10Z1 olfactory receptor family 10 subfamily Z member 1 1.5850 0.0152

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000164687 FABP5 fatty acid binding protein 5 -1.9337 0.0000
63340 ENSG00000167476 JSRP1 junctional sarcoplasmic reticulum protein 1 -1.9336 0.0000
63339 ENSG00000143355 LHX9 LIM homeobox 9 -1.9335 0.0000
63338 ENSG00000082497 SERTAD4 SERTA domain containing 4 -1.9333 0.0000
63337 ENSG00000163082 SGPP2 sphingosine-1-phosphate phosphatase 2 -1.9329 0.0000
63336 ENSG00000235098 ANKRD65 ankyrin repeat domain 65 -1.9328 0.0000
63335 ENSG00000196453 ZNF777 zinc finger protein 777 -1.9328 0.0000
63334 ENSG00000115540 MOB4 MOB family member 4, phocein -1.9326 0.0000
63333 ENSG00000279584 TEC -1.9326 0.0000
63332 ENSG00000150471 ADGRL3 adhesion G protein-coupled receptor L3 -1.9325 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...