SHOGoiN Cell Methylome: GSM2773722

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773722


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7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M349Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000247877 novel transcript 2.3219 0.0004
2 ENSG00000226341 MTCYBP39 MT-CYB pseudogene 39 2.0000 0.0000
3 ENSG00000234145 NAP1L4P3 nucleosome assembly protein 1 like 4 pseudogene 3 2.0000 0.0027
5 ENSG00000255531 NDUFS5P6 NADH:ubiquinone oxidoreductase subunit S5 pseudogene 6 2.0000 0.0000
6 ENSG00000282993 TEC 2.0000 0.0027
7 ENSG00000248237 protein phosphatase 2 (formerly 2A), regulatory subunit B, gamma isoform (PPP2R2C) pseudogene 1.7233 0.0000
8 ENSG00000169488 OR4K15 olfactory receptor family 4 subfamily K member 15 1.5850 0.0004
9 ENSG00000181819 KCTD9P2 potassium channel tetramerization domain containing 9 pseudogene 2 1.5850 0.0194
10 ENSG00000201957 NA 1.5850 0.0000
63332 ENSG00000270889 protein phosphatase 1, regulatory (inhibitor) subunit 14B (PPP1R14B) pseudogene -1.7720 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000120055 C10orf95 chromosome 10 open reading frame 95 -1.7729 0.0000
63340 ENSG00000226094 RPL7P3 ribosomal protein L7 pseudogene 3 -1.7728 0.0000
63339 ENSG00000171126 KCNG3 potassium voltage-gated channel modifier subfamily G member 3 -1.7728 0.0000
63338 ENSG00000178163 ZNF518B zinc finger protein 518B -1.7727 0.0000
63337 ENSG00000265293 ARGFXP2 arginine-fifty homeobox pseudogene 2 -1.7724 0.0000
63336 ENSG00000196453 ZNF777 zinc finger protein 777 -1.7723 0.0000
63335 ENSG00000243378 phospholipase A2, group X (PLA2G10) pseudogene -1.7722 0.0000
63334 ENSG00000247970 novel transcript -1.7721 0.0000
63333 ENSG00000204519 ZNF551 zinc finger protein 551 -1.7720 0.0000
63332 ENSG00000270889 protein phosphatase 1, regulatory (inhibitor) subunit 14B (PPP1R14B) pseudogene -1.7720 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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