SHOGoiN Cell Methylome: GSM2773732

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773732


Profile download
7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M359Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000254437 cytochrome c oxidase subunit VIa polypeptide 1 (COX6A1) pseudogene 2.8074 0.0000
2 ENSG00000223269 RN7SKP53 RN7SK pseudogene 53 2.5850 0.0000
3 ENSG00000236594 RPS27AP14 ribosomal protein S27a pseudogene 14 2.5850 0.0000
4 ENSG00000255167 novel transcript 2.5850 0.0000
5 ENSG00000278857 IGKV1D-12 immunoglobulin kappa variable 1D-12 2.5850 0.0000
6 ENSG00000278980 novel transcript 2.5850 0.0000
7 ENSG00000110848 CD69 CD69 molecule 2.3219 0.0004
8 ENSG00000280279 novel transcript 2.3219 0.0004
9 ENSG00000238724 NA 2.1308 0.0000
10 ENSG00000187653 TMSB4XP8 TMSB4X pseudogene 8 2.0847 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000223393 novel transcript -2.0378 0.0000
63340 ENSG00000185697 MYBL1 MYB proto-oncogene like 1 -2.0377 0.0000
63339 ENSG00000169900 PYDC1 pyrin domain containing 1 -2.0372 0.0000
63338 ENSG00000162951 LRRTM1 leucine rich repeat transmembrane neuronal 1 -2.0372 0.0000
63337 ENSG00000110811 P3H3 prolyl 3-hydroxylase 3 -2.0364 0.0000
63336 ENSG00000259708 novel transcript, antisense to DNAJA4 -2.0361 0.0000
63335 ENSG00000244251 ribosomal protein L9 (RPL9) pseudogene -2.0360 0.0000
63334 ENSG00000164379 FOXQ1 forkhead box Q1 -2.0357 0.0000
63333 ENSG00000185220 PGBD2 piggyBac transposable element derived 2 -2.0355 0.0000
63332 ENSG00000259863 SH3RF3-AS1 SH3RF3 antisense RNA 1 -2.0349 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...