SHOGoiN Cell Methylome: GSM2773736

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773736


Profile download
7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M363Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000283041 eukaryotic translation elongation factor 1 gamma ( 2.6481 0.0000
2 ENSG00000225397 pseudogene similar to part of ornithine aminotransferase (gyrate atrophy) (OAT) 2.3219 0.0000
3 ENSG00000226680 novel transcript 2.3219 0.0004
4 ENSG00000228519 RAN binding protein 1 pseudogene 2.0446 0.0000
5 ENSG00000213046 EEF1A1P32 eukaryotic translation elongation factor 1 alpha 1 pseudogene 32 2.0000 0.0026
6 ENSG00000261584 novel transcript 2.0000 0.0026
7 ENSG00000282865 TEC 2.0000 0.0000
8 ENSG00000284135 MIR3654 microRNA 3654 1.9757 0.0000
9 ENSG00000134538 SLCO1B1 solute carrier organic anion transporter family member 1B1 1.8962 0.0000
10 ENSG00000253676 TAGLN2P1 transgelin 2 pseudogene 1 1.6952 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000273413 novel transcript, antisense to ADIRF -2.0635 0.0000
63340 ENSG00000281131 SCHLAP1 SWI/SNF complex antagonist associated with prostate cancer 1 -2.0627 0.0000
63339 ENSG00000237950 novel transcript -2.0627 0.0000
63338 ENSG00000199396 RNA5S5 RNA, 5S ribosomal 5 -2.0623 0.0000
63337 ENSG00000273341 novel transcript -2.0611 0.0000
63336 ENSG00000157833 GAREM2 GRB2 associated regulator of MAPK1 subtype 2 -2.0609 0.0000
63335 ENSG00000122756 CNTFR ciliary neurotrophic factor receptor -2.0604 0.0000
63334 ENSG00000279744 TEC -2.0600 0.0000
63333 ENSG00000253767 PCDHGA8 protocadherin gamma subfamily A, 8 -2.0597 0.0000
63332 ENSG00000273483 novel transcript, antisense to WNT2B -2.0597 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...