SHOGoiN Cell Methylome: GSM2773747

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773747


Profile download
7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M374Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000206950 NA 3.0000 0.0000
2 ENSG00000228519 RAN binding protein 1 pseudogene 2.8190 0.0000
3 ENSG00000283041 eukaryotic translation elongation factor 1 gamma ( 2.3678 0.0000
4 ENSG00000270763 DDX43P2 DEAD-box helicase 43 pseudogene 2 2.3219 0.0006
5 ENSG00000213110 ring finger protein 11 (RNF11) pseudogene 2.1732 0.0000
6 ENSG00000229132 EIF4A1P10 eukaryotic translation initiation factor 4A1 pseudogene 10 2.1273 0.0000
7 ENSG00000224712 NPIPA3 nuclear pore complex interacting protein family member A3 2.0000 0.0000
8 ENSG00000258844 novel transcript 2.0000 0.0039
9 ENSG00000260933 geminin, DNA replication inhibitor (GMNN) pseudogene 2.0000 0.0039
10 ENSG00000261523 novel transcript, antisense to a novel member of the nuclear pore complex interacting protein-like NPIPL gene family 2.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000100399 CHADL chondroadherin like -2.1659 0.0000
63340 ENSG00000232977 LINC00327 long intergenic non-protein coding RNA 327 -2.1651 0.0000
63339 ENSG00000223886 ring finger protein 181 (RNF181) pseudogene -2.1637 0.0000
63338 ENSG00000170191 NANP N-acetylneuraminic acid phosphatase -2.1633 0.0000
63337 ENSG00000263697 MIR3621 microRNA 3621 -2.1629 0.0000
63336 ENSG00000189431 RASSF10 Ras association domain family member 10 -2.1626 0.0000
63335 ENSG00000273413 novel transcript, antisense to ADIRF -2.1620 0.0000
63334 ENSG00000164746 C7orf57 chromosome 7 open reading frame 57 -2.1614 0.0000
63333 ENSG00000259285 novel transcript, antisense to ALDH1A2 -2.1607 0.0000
63332 ENSG00000280414 novel transcript -2.1607 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...