SHOGoiN Cell Methylome: GSM2773748

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773748


Profile download
7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M375Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000075624 ACTB actin beta 3.1693 0.0000
2 ENSG00000070501 POLB DNA polymerase beta 2.7823 0.0000
3 ENSG00000240395 RPL5P23 ribosomal protein L5 pseudogene 23 2.7823 0.0000
4 ENSG00000111057 KRT18 keratin 18 2.6595 0.0000
5 ENSG00000263508 novel transcript 2.5850 0.0000
7 ENSG00000217889 KRT18P48 keratin 18 pseudogene 48 2.5355 0.0000
9 ENSG00000245667 novel transcript 2.4526 0.0000
10 ENSG00000170421 KRT8 keratin 8 2.4505 0.0000
63333 ENSG00000262304 novel readthrough SHPK-TRPV1 protein -1.0000 0.2114
63334 ENSG00000262312 novel transcript, antisense to NLRC3 -1.0000 1.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000263355 AKR1B10P2 aldo-keto reductase family 1 member B10 pseudogene 2 -1.0000 1.0000
63340 ENSG00000263317 LINC01982 long intergenic non-protein coding RNA 1982 -1.0000 1.0000
63339 ENSG00000262624 novel transcript, antisense to TMEM102 -1.0000 0.3471
63338 ENSG00000262585 LINC01979 long intergenic non-protein coding RNA 1979 -1.0000 1.0000
63337 ENSG00000262576 PCDHGA4 protocadherin gamma subfamily A, 4 -1.0000 0.0017
63336 ENSG00000262521 novel transcript -1.0000 0.1303
63335 ENSG00000262370 novel transcript -1.0000 1.0000
63334 ENSG00000262312 novel transcript, antisense to NLRC3 -1.0000 1.0000
63333 ENSG00000262304 novel readthrough SHPK-TRPV1 protein -1.0000 0.2114
10 ENSG00000170421 KRT8 keratin 8 2.4505 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...