SHOGoiN Cell Methylome: GSM2773754

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773754


Profile download
7020000000000000000000Sequence Read ArchiveSRP074598SRP074598_M381Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeBlastocystHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000075624 ACTB actin beta 4.0198 0.0000
2 ENSG00000229105 ASTN2-AS1 ASTN2 antisense RNA 1 3.8774 0.0000
3 ENSG00000207281 NA 3.8074 0.0000
4 ENSG00000143493 INTS7 integrator complex subunit 7 3.7842 0.0000
5 ENSG00000200879 SNORD14E small nucleolar RNA, C/D box 14E 3.6962 0.0000
6 ENSG00000166796 LDHC lactate dehydrogenase C 3.6387 0.0000
7 ENSG00000072201 LNX1 ligand of numb-protein X 1 3.5850 0.0000
8 ENSG00000257025 novel transcript 3.5850 0.0000
9 ENSG00000205755 CRLF2 cytokine receptor like factor 2 3.5799 0.0000
10 ENSG00000258751 novel transcript 3.5711 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000254859 novel transcript -1.8250 0.0000
63340 ENSG00000160712 IL6R interleukin 6 receptor -1.8215 0.0046
63339 ENSG00000063761 ADCK1 aarF domain containing kinase 1 -1.8196 0.0212
63338 ENSG00000188784 PLA2G2E phospholipase A2 group IIE -1.8185 0.0000
63337 ENSG00000165804 ZNF219 zinc finger protein 219 -1.8174 0.0000
63336 ENSG00000130725 UBE2M ubiquitin conjugating enzyme E2 M -1.8155 0.0000
63335 ENSG00000183248 PRR36 proline rich 36 -1.8147 0.0000
63334 ENSG00000211931 IGHD2-2 immunoglobulin heavy diversity 2-2 -1.8118 0.4149
63333 ENSG00000268361 novel protein -1.8110 0.0000
63332 ENSG00000234608 MAPKAPK5-AS1 MAPKAPK5 antisense RNA 1 -1.8095 0.0203

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...