Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773766

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2773766 Profile download	7020000000000000000000	Sequence Read Archive	SRP074598	SRP074598_M393	Single-cell DNA methylome sequencing of human preimplantation embryos	Methylome	Blastocyst	Human	Early embryonic tissue	Bisulfite-Seq (PBAT)	HiSeq 2500	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSG00000200879	SNORD14E	small nucleolar RNA, C/D box 14E	4.2297	0.0000
2	ENSG00000229060		novel pseudogene	3.9069	0.0000
3	ENSG00000251562	MALAT1	metastasis associated lung adenocarcinoma transcript 1	3.8971	0.0000
4	ENSG00000278217		NA	3.8971	0.0000
5	ENSG00000265401		novel transcript	3.7987	0.0000
7	ENSG00000217889	KRT18P48	keratin 18 pseudogene 48	3.7845	0.0000
9	ENSG00000265095	FTLP12	ferritin light chain pseudogene 12	3.7495	0.0000
10	ENSG00000075624	ACTB	actin beta	3.7169	0.0000
63119	ENSG00000280153		TEC	-1.0000	0.0598
63121	ENSG00000280254		TEC	-1.0000	0.0146

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
63128	ENSG00000280405		novel transcript	-1.0000	0.0018
63127	ENSG00000280377		tec	-1.0000	0.0598
63126	ENSG00000280369		tec	-1.0000	0.4945
63125	ENSG00000280354		novel transcript	-1.0000	0.0598
63124	ENSG00000280335		TEC	-1.0000	0.0296
63123	ENSG00000280334		TEC	-1.0000	0.2445
63122	ENSG00000280268		TEC	-1.0000	0.0146
63121	ENSG00000280254		TEC	-1.0000	0.0146
63119	ENSG00000280153		TEC	-1.0000	0.0598
10	ENSG00000075624	ACTB	actin beta	3.7169	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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