Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2773766

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773766


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7020000000000000000000Sequence Read ArchiveSRP074598SRP074598_M393Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeBlastocystHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000200879 SNORD14E small nucleolar RNA, C/D box 14E 4.2297 0.0000
2 ENSG00000229060 novel pseudogene 3.9069 0.0000
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 3.8971 0.0000
4 ENSG00000278217 NA 3.8971 0.0000
5 ENSG00000265401 novel transcript 3.7987 0.0000
7 ENSG00000217889 KRT18P48 keratin 18 pseudogene 48 3.7845 0.0000
9 ENSG00000265095 FTLP12 ferritin light chain pseudogene 12 3.7495 0.0000
10 ENSG00000075624 ACTB actin beta 3.7169 0.0000
63119 ENSG00000280153 TEC -1.0000 0.0598
63121 ENSG00000280254 TEC -1.0000 0.0146

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63128 ENSG00000280405 novel transcript -1.0000 0.0018
63127 ENSG00000280377 tec -1.0000 0.0598
63126 ENSG00000280369 tec -1.0000 0.4945
63125 ENSG00000280354 novel transcript -1.0000 0.0598
63124 ENSG00000280335 TEC -1.0000 0.0296
63123 ENSG00000280334 TEC -1.0000 0.2445
63122 ENSG00000280268 TEC -1.0000 0.0146
63121 ENSG00000280254 TEC -1.0000 0.0146
63119 ENSG00000280153 TEC -1.0000 0.0598
10 ENSG00000075624 ACTB actin beta 3.7169 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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