SHOGoiN Cell Methylome: GSM2773767

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773767


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7020000000000000000000Sequence Read ArchiveSRP074598SRP074598_M394Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeBlastocystHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000254202 novel transcript 4.3219 0.0000
2 ENSG00000279635 tec 3.7004 0.0000
3 ENSG00000229600 novel transcript 3.0000 0.0000
4 ENSG00000199515 NA 2.9203 0.0000
5 ENSG00000213512 GBP7 guanylate binding protein 7 2.8074 0.0000
6 ENSG00000227240 novel transcript 2.8074 0.0000
7 ENSG00000275647 zinc finger protein 93 (ZNF93) pseudogene 2.8074 0.0000
8 ENSG00000249752 novel transcript 2.7925 0.0000
9 ENSG00000229608 GOLGA2P4 GOLGA2 pseudogene 4 2.6634 0.0000
10 ENSG00000234009 RPL5P34 ribosomal protein L5 pseudogene 34 2.6634 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000106511 MEOX2 mesenchyme homeobox 2 -2.5914 0.0000
63340 ENSG00000163811 WDR43 WD repeat domain 43 -2.5912 0.0000
63339 ENSG00000255867 DENND5B-AS1 DENND5B antisense RNA 1 -2.5902 0.0000
63338 ENSG00000241014 novel platelet-activating factor receptor family pseudogene -2.5895 0.0000
63337 ENSG00000264171 MIR4305 microRNA 4305 -2.5892 0.0000
63336 ENSG00000234456 MAGI2-AS3 MAGI2 antisense RNA 3 -2.5886 0.0000
63335 ENSG00000250786 SNHG18 small nucleolar RNA host gene 18 -2.5885 0.0000
63334 ENSG00000236130 PTCSC2 papillary thyroid carcinoma susceptibility candidate 2 -2.5880 0.0000
63333 ENSG00000272141 novel transcript -2.5865 0.0000
63332 ENSG00000177374 HIC1 HIC ZBTB transcriptional repressor 1 -2.5863 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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