SHOGoiN Cell Methylome: GSM2773867

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2773867


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7020007000000000000000-780Sequence Read ArchiveSRP074598SRP074598_M494Single-cell DNA methylome sequencing of human preimplantation embryosMethylomeTEHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000255633 MTRNR2L9 MT-RNR2 like 9 9.7150 0.0000
2 ENSG00000275549 STPG3-AS1 STPG3 antisense RNA 1 8.9871 0.0000
3 ENSG00000213269 ribosomal protein S6 (RPS6) pseudogene 8.9386 0.0000
4 ENSG00000265401 novel transcript 8.6056 0.0000
5 ENSG00000261612 SUB1P3 SUB1 homolog, transcriptional regulator pseudogene 3 8.6019 0.0000
6 ENSG00000244313 ribosomal protein S10 (RPS10) pseudogene 8.5624 0.0000
7 ENSG00000183389 OR56A4 olfactory receptor family 56 subfamily A member 4 8.5090 0.0000
8 ENSG00000254831 KRT18P58 keratin 18 pseudogene 58 8.5090 0.0000
9 ENSG00000265095 FTLP12 ferritin light chain pseudogene 12 8.4328 0.0000
10 ENSG00000187475 HIST1H1T histone cluster 1 H1 family member t 8.3306 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000274292 novel transcript -1.0000 0.0000
63340 ENSG00000274286 ADRA2B adrenoceptor alpha 2B -1.0000 0.0000
63339 ENSG00000274265 novel transcript -1.0000 0.0000
63338 ENSG00000274214 sorting nexin 18 (SNX18) pseudogene -1.0000 0.0000
63337 ENSG00000274209 ANTXRL ANTXR like -1.0000 0.0288
63336 ENSG00000274178 PRAMEF28P PRAME family member 28, pseudogene -1.0000 0.0288
63335 ENSG00000274156 novel transcript -1.0000 0.0288
63334 ENSG00000274133 exosome component 6 (EXOSC6) pseudogene -1.0000 0.0000
63333 ENSG00000274099 ABCB10P1 ABCB10 pseudogene 1 -1.0000 0.0000
63332 ENSG00000274079 NA -1.0000 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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