Oral(Poster) presentation

• 山根順子、和田卓巳、大槻博礼、猪俣孝二、鈴木睦、久木友花、 関根秀一、上月裕一、小林健太、曽根秀子、山下潤、大澤光次郎、斎藤潤、藤渕航
  iPS細胞による個別化予防を目指した、迅速・広範な標的ターゲットへの化学物質評価システム「StemPanTox」 (Poster)
  幹細胞を用いた化学物質リスク情報共有化コンソーシアムscChemRISC 202年度年会
  March, Kyoto/Online.
  2022.3.1


• Kuan-Chun Lan, Wataru Fujibuchi
  Identifying the Minimal Set of Key Developmental Genes by Spatiotemporal Computational Reconstruction of Embryogenesis (Poster)
  CiRA International Symposium Virtual
  February, Online.
  2022.2.16-17


• Kuan-Chun Lan, Wataru Fujibuchi
  Identifying the Minimal Set of Principles for Computational Reconstruction of Embryogenesis with Spatiotemporal Transcriptome Analysis (Poster)
  ISSCR/JSRM International Symposium Virtual
  October, Online.
  2021.10.27-29


• Takumi Wada, Wataru Fujibuchi
  CELL IDENTIFICATION BY INFORMATION THEORETIC APPROACH TO SINGLE CELL RNASEQ DATA FOR QUALITY REFERENCE OF STEM CELL THERAPY (Poster)
  ISSCR/JSRM International Symposium Virtual
  October, Online.
  2021.10.27-29


• Junko Yamane, Takumi Wada, Tomoka Hisaki, Shuichi Sekine, Hirokazu Kouzuki, Mitsujiro Osawa, Megumu Saito, Hideko Sone, Wataru Fujibuchi
  Screening of human iPSCs for chemical toxicity prediction based on RNA-seq data from human ESCs (Poster)
  ISSCR/JSRM International Symposium Virtual
  October, Online.
  2021.10.27-29


• 山根　順子、Naila Shinwari、藍　冠鈞、陳　影、和田　卓巳、藤渕　航
  幹細胞データベース"SKIP"と細胞分類のソリューション "SHOGoiN"(Poster)
  トーゴーの日シンポジウム2021
  October, Online.
  2021.10.5


• Ying Chen, Wataru Fujibuchi
  Application of Artificial Intelligence and Machine Learning in Stem Cell Data Mining
  PSConf 2021
  April, Online.
  2021.4.22


• Babasaheb Berad, Wataru Fujibuchi
  Establishment of Drug Screening Systems for Cell Therapy Based on Artificial Intelligence (Poster)
  第2回メディカルイノベーション大学院プログラム医薬系研究交流サロン
  April, Online.
  2021.4.19-22


• Kuan-Chun Lan, Wataru Fujibuchi
  Spatio-temporal transcriptome analysis of embryogenesis (Poster)
  第2回メディカルイノベーション大学院プログラム医薬系研究交流サロン
  April, Online.
  2021.4.19-22


• Tomoya Mori, Naila Shinwari, Wataru Fujibuchi
  scMontage: Fast and Robust Gene Expression Similarity Search for Massive Single-cell Data (Poster)
  第2回メディカルイノベーション大学院プログラム医薬系研究交流サロン
  April, Online.
  2021.4.19-22


• 山根　順子、藤渕　航
  藤渕研究室紹介
  第2回メディカルイノベーション大学院プログラム医薬系研究交流サロン
  April, Online.
  2021.4.19-22


• Yulia Panina, Junko Yamane, Kenta Kobayashi, Hideko Sone, Wataru Fujibuchi
  Human ES and iPS cells display less drug resistance than differentiated cells, and naïve-state induction further decreases drug resistance (Poster)
  幹細胞を用いた化学物質リスク情報共有化コンソーシアムscChemRISC2021年度年会
  April, Online.
  2021.4.16


• Naila Shinwari, Tomoya Mori, Wataru Fujibuchi
  scMontage: Fast and Robust Gene Expression Similarity Search for Massive Single-cell Data (Poster)
  Pacific Symposium on Biocomputing (PSB) 2021
  January, Online.
  2021.1.5-7


• Naila Shinwari, Tomoya Mori, Wataru Fujibuchi
  scMontage: Fast and Robust Gene Expression Similarity Search for Massive Single-cell Data (Poster)
  The 19th International Conference on Bioinformatics (InCoB 2020)
  November, Online.
  2020.11.25-29


• Wataru Fujibuchi
  E-SPRESSO: Self-organization-map (SOM) based 3D-tissue reconstruction from scRNA-seq data
  Human Cell Atlas Asia Meeting 2020
  October, Online.
  2020.10.22-23


• 山根　順子、陳　影、Naila Shinwari、藍　冠鈞、藤渕　航
  再生医療研究をサポートする幹細胞データベース"SKIP"と細胞分類のソリューション "SHOGoiN"(Poster)
  トーゴーの日シンポジウム2020
  October, Online.
  2020.10.5


• 山根　順子、藤渕　航
  ヒト幹細胞試験による迅速・正確・低コストの化学物質ハザードAI評価法の開発
  2020年日化協LRI研究報告会
  August, Online.
  2020.8.21


• Ying Chen, Sumihiro Maeda, Johannes Dewender, Stefanie Seltmann, Andreas Kurtz, Hiroshi Masuya, Yukio Nakamura, Michael Sheldon, Glyn Stacey, Yulia Panina, Wataru Fujibuchi
  Integrated Collection of Stem Cell Bank data (ICSCB) by MIACARM(Poster)
  京都大学メディカルイノベーション卓越大学院プログラム　医学系研究交流サロン
  January, Kyoto.
  2020.1.28-31


• 山根　順子、陳　影、Naila Shinwari、Yulia Panina、澤田　晋、湯地　みどり、藤渕　航
  1細胞解析に有効なヒト細胞情報データベース "SHOGoiN"(Poster)
  京都大学メディカルイノベーション卓越大学院プログラム　医学系研究交流サロン
  January, Kyoto.
  2020.1.28-31


• Yulia Panina, 山根　順子、小林　健太、藤渕　航
  Development of a fast, reliable, low-cost toxicity prediction system using AI and reset iPS cells(Poster)
  京都大学メディカルイノベーション卓越大学院プログラム　医学系研究交流サロン
  January, Kyoto.
  2020.1.28-31

　
• Yamane Junko, Chen Ying, Panina Yulia, Ogino Toshiaki, Sawada Susumu, Yuji Midori, Shinwari Naila, Fujibuchi Wataru
  "SHOGoiN" - a diverse human normal cell database for single-cell analysis(Poster)
  CiRA 2019 International Symposium
  November, Kyoto.
  2019.11.27-29


• Yoki Tsuda, Wataru Fujibuchi
  Gene network analysis of autoimmune cholestatic liver and inflammatory bowel diseases(Poster)
  CiRA 2019 International Symposium
  November, Kyoto.
  2019.11.27-29


• Yulia Panina, Arno Germond, Tomonobu Watanabe
  Analysis of stability of 70 housekeeping genes during iPS reprogramming (Poster)
  CiRA 2019 International Symposium
  November, Kyoto.
  2019.11.27-29


• Kuan-Chun Lan, Wataru Fujibuchi
  In silico 3D tissue reconstruction model for spatial discriminator genes identification by enhanced self-organizing map (SOM) clustering (Poster)
  CiRA 2019 International Symposium
  November, Kyoto.
  2019.11.27-29


• Ying Chen, Junko Yamane, Wataru Fujibuchi
  Discovery of tissue specific biological processes for diseases modeling(Poster)
  CiRA 2019 International Symposium
  November, Kyoto.
  2019.11.27-29

　
• 山根　順子、陳　影、Yulia Panina、荻野　利昭、澤田　晋、小林　健太、湯地　みどり、Naila Shinwari、藤渕　航
  1細胞解析に有効なヒト細胞情報データベース "SHOGoiN"(Poster)
  トーゴーの日シンポジウム2019
  October, Tokyo.
  2019.10.5

　
• Yulia Panina
  SHOGoiN cell marker database: update and characterization
  JSPS-DADD Workshop 2019-2
  September, Berlin.
  2019.9.16-18


• Ying Chen
  Discovery of tissue specific biological processes for disease modeling 
  JSPS-DADD Workshop 2019-2
  September, Berlin.
  2019.9.16-18


• Junko Yamane
  Identification of cellular characteristics at single-cell level
  JSPS-DADD Workshop 2019-2
  September, Berlin.
  2019.9.16-18


• Wataru Fujibuchi
  How to authenticate cell types - stability and identity issues
  JSPS-DADD Workshop 2019-2
  September, Berlin.
  2019.9.16-18


• Susumu Sawada, Wataru Fujibuchi
  Estimation of the Whole Mouse Cell Types (Poster)
  日本バイオインフォマティクス学会2019年年会第8回生命医薬情報学連合大会IIBMP2019
  September, Tokyo.
  2019.9.9-11

　
• Ying C, Junko Y, Wataru F
  Discovery of cell-type-specific biological processes for disease modeling (Poster)
  日本バイオインフォマティクス学会2019年年会第8回生命医薬情報学連合大会IIBMP2019
  September, Tokyo.
  2019.9.9-11


• Yulia Panina, 山根　順子、曽根　秀子、藤渕　航
  ヒト幹細胞試験による迅速・正確・低コストの化学物質ハザードAI評価法の開発(Poster)
  2019年日化協LRI研究報告会
  August, Tokyo.
  2019.8.30

　　
• Ying Chen, Sumihiro Maeda, Hideyuki Okano, Johannes Dewender, Stefanie Seltmann, Andreas Kurtz, Hiroshi Masuya, Yukio Nakamura, Michael Sheldon, Glyn Stacey, and Wataru Fujibuchi
  Integrated Collection of Stem Cell Bank data (ISCB) by MIACARM (Poster)
  ISSCR Annual Meeting 2019
  June, Los Angeles.
  2019.6.26-29

　 　
• 陳　影、藤渕　航、市原　学、大迫　誠一郎
  Different transcriptome patterns for chronic and acute inflammation in 1-Bromopropane exposed rats (Poster)
  新学術領域【炎症細胞社会学】班会議・ワークショップ
  May, Ishikawa.
  2019.5.23


• Junko Yamane, Hiroki Takahashi, Midori Yuji, Naila Shinwari, Ying Chen, and Wataru Fujibuchi
  ”SHOGoiN”, an integrated cell database effective for single-cell analysis (Poster)
  EMBO Workshop
  May, Tokyo.
  2019.5.20-22

　
• Ying C, Junko Y, Wataru F
  Discovery of cell-type-specific biological processes for disease modeling (Poster)
  EMBO Workshop
  May, Tokyo.
  2019.5.20-22

　
• Susumu Sawada and Wataru Fujibuchi
  Estimating the number of human cell types by independent component analysis (Poster)
  EMBO Workshop
  May, Tokyo.
  2019.5.20-22

　
• Yulia Panina
  A new mathematical model for RT-qPCR data analysis to improve precision and reduce pipetting labor
  Japan-Germany International Workshop 2019-1 The Human Cell Type Authentication Initiative
  May, Kyoto.
  2019.5.17


• Junko Yamane
  Revolution of chemical toxicity prediction system using human ES/iPS cells
  Japan-Germany International Workshop 2019-1 The Human Cell Type Authentication Initiative
  May, Kyoto.
  2019.5.17


• Susumu Sawada
  Estimating the number of human cell types by independent component analysis
  Japan-Germany International Workshop 2019-1 The Human Cell Type Authentication Initiative
  May, Kyoto.
  2019.5.15


• Ying Chen
  Discovery of cell-type-specific biological processes for disease modeling
  Japan-Germany International Workshop 2019-1 The Human Cell Type Authentication Initiative
  May, Kyoto.
  2019.5.15


• Wataru Fujibuchi
  Current knowledge on cell stability and differentiation
  Japan-Germany International Workshop 2019-1 The Human Cell Type Authentication Initiative
  May, Kyoto.
  2019.5.15


• 高橋　弘樹
  AIの基本
  幹細胞を用いた化学物質リスク情報共有化コンソーシアムscChemRISC 2019年度年会・シンポジウム
  February, Kyoto.
  2019.2.15


• 陳　影、山根　順子、小櫻　裕司、高橋　弘樹、藤渕　航
  SHOGoiN：1細胞解析に有効なヒト細胞情報データベース(Poster)
  トーゴーの日シンポジウム2018
  October, Tokyo.
  2018.10.5


• Yuji Kozakura
  Development of the method having robustness to single cell data in variable experimental condition
  JSPS-DADD Workshop
  October, Berlin.
  2018.10.01-02


• Hiroki Takahashi
  Machine learning classifier for transcriptome data of human cells
  JSPS-DADD Workshop
  October, Berlin.
  2018.10.01-02


• Junko Yamane
  Consideration of cell type definition
  JSPS-DADD Workshop
  October, Berlin.
  2018.10.01-02


• Wataru Fujibuchi
  Updates by Kyoto
  JSPS-DADD Workshop
  October, Berlin.
  2018.10.01-02


• Ying Chen and Wataru Fujibuchi
  Body-wide Tissue Analysis to Identify Differential And Core Epithelial Transcriptome(Poster)
  第7回生命医薬情報学連合大会
  September, Tsuruoka.
  2018.9.19-21

　　
• Hiroki Takahashi, Junko Yamane and Wataru Fujibuchi
  遺伝子発現データと転移学習を用いた畳み込みニューラルネットワークによる小規模データセットのための毒性予測システム(Poster)
  第7回生命医薬情報学連合大会
  September, Tsuruoka.
  2018.9.19-21

　　
• Yuji Kozakura and Wataru Fujibuchi
  遺伝子モジュールに基づく細胞間類似度算出法の開発(Poster)
  第7回生命医薬情報学連合大会
  September, Tsuruoka.
  2018.9.19-21


• 高橋　弘樹、山根　順子、藤渕　航
  少ない遺伝子発現データを活用するための畳み込みニューラルネットワークと転移学習による毒性予測システム
  第55回バイオ情報学研究会
  September, Tsuruoka.
  2018.9.18


• 小櫻　裕司、藤渕　航
  遺伝子モジュールに基づく細胞間類似度算出法の開発
  第55回バイオ情報学研究会
  September, Tsuruoka.
  2018.9.18


• Emma Gaune and Wataru Fujibuchi
  Improving cell type classification using differential expression analysis and module detection methods(Poster)
  AMGEN SCHOLARS JAPAN SYMPOSIUM 2018
  August, Kyoto
  2018.8.2


• Wataru Fujibuchi
  SCCHEMRISC: A JAPANESE CONSORTIUM FOR SHARING STEM CELL-BASED CHEMICAL RISK INFORMATION ASSESSED BY GENE NETWORKS.(Poster)
  ISSCR 2018 Annual Meeting
  June, Melbourne.
  2018.6.20


• Hiroki Takahashi, Junko Yamane and Wataru Fujibuchi
  Deep learning approaches for toxicity prediction of drugs with small-scale gene expression data.(Poster)
  OPENTOX ASIA 2018
  May, Tokyo.
  2018.5.24


• Daria Doncevic
  Deciper the C. elegans transcriptome
  Japan-Germany International Workshop 2018-1 The Human Cell Type Authentication Initiative
  April, Kyoto.
  2018.4.23-24


• Hiroki Takahashi
  Transcriptom ic pattern recognition by AI toxicity prediction system
  Japan-Germany International Workshop 2018-1 The Human Cell Type Authentication Initiative
  April, Kyoto.
  2018.4.23-24


• Ying Chen
  Progress in MIACARM: Minimum Information Guidelines for Stem Cell Data Unification
  Japan-Germany International Workshop 2018-1 The Human Cell Type Authentication Initiative
  April, Kyoto.
  2018.4.23-24


• Kazunori Zikihara
  Toxicology with stem cells
  Japan-Germany International Workshop 2018-1 The Human Cell Type Authentication Initiative
  April, Kyoto.
  2018.4.23-24


• Junko Yamane
  Single-cell methylome technology
  Japan-Germany International Workshop 2018-1 The Human Cell Type Authentication Initiative
  April, Kyoto.
  2018.4.23-24

　　　　　　　　　　　　　　
• Wataru Fujibuchi
  Concept of project in Japan
  Japan-Germany International Workshop 2018-1 The Human Cell Type Authentication Initiative
  April, Kyoto.
  2018.4.23-24


• 湯地　みどり, 森　智弥, 山根　順子, 谷山　暢子, 山根木　康嗣, 藤渕　航
  ヒト細胞の明確な分類および細胞認定法の確立
  第17回日本再生医療学会総会,
  March, Yokohama.
  2018.3.21-23


• 湯地　みどり
  医療・創薬分野をサポートする統合ヒト細胞情報データベースSHOGoiN
  第4回医療・介護総合EXPO,
  February, Osaka.
  2018.2.21


• Tomoya Mori and Wataru Fujibuchi
  Ab initio 3D reconstruction algorithm for mid-gastrula mouse embryo using machine learning.(Poster)
  CiRA 2017 International Symposium,
  November, Kyoto.
  2017.11.6-8


• Yuji Kozakura, Tomoya Mori and Wataru Fujibuchi
  Comparison of cell type classification methods by single-cell transcriptome toward the establishment of an evaluation method for cell quality.(Poster)
  CiRA 2017 International Symposium,
  November, Kyoto.
  2017.11.6-8


• Hiroki Takahashi, Junko Yamane and Wataru Fujibuchi
  Machine learning prediction for toxicities of compounds using human embryonic stem cells.(Poster)
  CiRA 2017 International Symposium,
  November, Kyoto.
  2017.11.6-8


• Midori Yuji, Tomoya Mori, Junko Yamane, Nobuko Taniyama, Koji Yamanegi and Wataru Fujibuchi
  Classification design of human cell types in compliance with MIACARM (Minimum Information About a Cellular Assay for Regenerative Medicine) quality guidelines.(Poster)
  CiRA 2017 International Symposium,
  November, Kyoto.
  2017.11.6-8


• 山根　順子, 湯地　みどり, 森　智弥, 谷山　暢子, 山根木　康嗣, 藤渕　航
  1細胞解析に有効なヒト細胞情報データベース「SHOGoiN」
  トーゴーの日シンポジウム2017,
  October, Tokyo.
  2017.10.4-5


• Ying Chen, Tomoya Mori, Tsuyoshi Kato, Junko Yamane, Yoshikatsu Nakano, Hiroyuki Fujimura, Shoichiro Suda, Toru Maruyama, Michihiro Ito, Haruko Takeyama and Wataru Fujibuchi
  Forecasting coral reef system through multiple-kernel support vector regression.(Poster)
  第6回生命医薬情報学連合大会,
  September, Sapporo.
  2017.9.27-29


• 髙橋　弘樹, 山根　順子, 藤渕　航
  Multiple kernel support vector machine can generate weights of feature matrices for toxicity prediction.
  情報処理学会 第51回バイオ情報学研究会 (SIGBIO),
  September, Sapporo.
  2017.9.26


• 小櫻　裕司, 森　智弥, 藤渕　航
  Comparison of clustering methods for single-cell transcriptome analysis.
  情報処理学会 第51回バイオ情報学研究会 (SIGBIO),
  September, Sapporo.
  2017.9.26


• 谷山　暢子, 小林　健太, 山根　順子, 森　智弥, 山下　潤, 藤渕　航
  1細胞DNAメチローム解析による細胞個体差のエピジェネティック解析
  日本遺伝学会第89回大会,
  September, Okayama.
  2017.9.13-16


• Anna Elizabeth Sappington and Wataru Fujibuchi
  Improving models of cell type domains with machine learning and scRNA-Seq.(Poster) BEST PRESENTATION AWARD
  AMGEN SCHOLARS JAPAN SYMPOSIUM 2017,
  August, Tokyo.
  2017.8.9-10


• Junko Yamane, Tomoya Mori, Nobuko Taniyama, Kenta Kobayashi, and Wataru Fujibuchi
  Development of new enhanced single-cell RRBS protocol toward in-silico 3D tissue reconstruction.(Poster)
  理研　シングルセル　サイエンス　シンポジウム,
  July, Yokohama.
  2017.7.6-7


• Tomoya Mori and Wataru Fujibuchi
  Development of ab initio 3D Reconstruction Algorithm for Mid-gastrula Mouse Embryo from Transcriptome Using Kernel Self-organizing Map.(Oral and Poster)
  理研　シングルセル　サイエンス　シンポジウム,
  July, Yokohama.
  2017.7.6-7


• Yuji Kozakura and Wataru Fujibuchi
  Profiing of endogenous retrovirus-derived long non-coding RNAs in brain tissue.(Poster)
  理研　シングルセル　サイエンス　シンポジウム,
  July, Yokohama.
  2017.7.6-7


• Midori Yuji, Kunie Sakurai, Tomoya Mori, Junko Yamane, Nobuko Taniyama, Kenta Kobayashi, Koji Yamanegi and Wataru Fujibuchi
  Clear classification of human cells and establishment of cell identification system.(Poster)
  理研　シングルセル　サイエンス　シンポジウム,
  July, Yokohama.
  2017.7.6-7


• Hiroki Takahashi and Wataru Fujibuchi
  Identifying subtypes of tissue stem cells with single-cell analysis.(Poster)
  理研　シングルセル　サイエンス　シンポジウム,
  July, Yokohama.
  2017.7.6-7


• Junko Yamane, Tomoya Mori, Nobuko Taniyama, Kenta Kobayashi, Yoshiko Okamura, Wataru Fujibuchi
  Development of enhanced single-cell RRBS method toward 3D tissue reconstruction.(Poster)
  The 12th International Workshop on Advanced Genomics,
  June, Tokyo.
  2017.6.27-29


• Tomoya Mori and Wataru Fujibuchi
  Development of 3D Reconstruction Method for Mid-gastrula Mouse Embryo from Transcriptome Using Self-organizing Map.(Poster)
  The 12th International Workshop on Advanced Genomics,
  June, Tokyo.
  2017.6.27-29


• Kunie Sakurai and Wataru Fujibuchi
  Developing global cellular information retrieval system with minimum reporting guidelines on cellular data for regenerative medicine.(Poster)
  2ND CHALLENGES IN COMPUTATIONAL BIOLOGY: GENE EXPRESSION DATA ANALYSIS,
  December, Mainz.
  2016.12.1-2


• Junko Yamane, Tomoya Mori, Nobuko Taniyama, Kenta Kobayashi, Wataru Fujibuchi
  Development of Enhanced Reduced Representation Bisulfite Sequencing Method for Single-cell Methylome Analysis.
  2ND CHALLENGES IN COMPUTATIONAL BIOLOGY: GENE EXPRESSION DATA ANALYSIS,
  December, Mainz.
  2016.12.1-2


• Tomoya Mori, Junko Yamane, Kenta Kobayashi, Nobuko Taniyama, Takanori Tano, Wataru Fujibuchi
  Development of 3D Tissue Reconstruction Method from Single- cell RNA-seq Data.
  2ND CHALLENGES IN COMPUTATIONAL BIOLOGY: GENE EXPRESSION DATA ANALYSIS,
  December, Mainz.
  2016.12.1-2


• 岡西　孝真, 藤村　弘行, 中野　義勝, 須田　彰一郎, 曽根　秀子, 藤渕　航
  カーネル法を用いたサポートベクトル回帰による海洋統合解析 (Poster)
  第19回情報論的学習理論ワークショップ (IBIS2016),
  November, Kyoto.
  2016.11.16-19


• Tomoya Mori, Junko Yamane, Nobuko Taniyama, Kenta Kobayashi and Wataru Fujibuchi
  DEVELOPMENT OF 3D-RECONSTRUCTION METHOD FOR MOUSE BLASTOCYST FROM SINGLE-CELL TRANSCRIPTOME DATA.(Poster)
  International Conference on Single Cell Research 2016,
  November, Tokyo.
  2016.11.16-17


• 谷山　暢子, 小林　健太, 山根　順子, 森　智弥, 山下　潤, 藤渕　航
  マウス胚盤胞を用いた1細胞メチローム解析
  日本遺伝学会第88回大会,
  September, Mishima.
  2016.9.7-9


• Kunie Sakurai, Andreas Kurtz, Glyn Stacy, Michel Sheldon, and Wataru Fujibuchi
  International collaboration for developing the standardized reporting guideline on cellular assays and global cellular data retrieval system for regenerative medicine.(Poster)
  ISSCR2016 Annual Meeting,
  June, San Francisco.
  2016.6.22-25


• Kunie Sakurai, Midori Yuji, Junko Yamane, Kenta Kobayashi, Nobuko Taniyama, Takeaki Taniguchi, Koji Yamanegi, and Wataru Fujibuchi
  SHOGoiN Database: a database to integrate standardized data and diverse knowledge of cells.(Poster)
  Systems Biology: Global Regulation of Gene Expression,
  Cold Spring Harbor Laboratory, March, New York.
  2016.3.15-19


• Yuki Kato and Wataru Fujibuchi
  A computational method for dissecting single-cell populations based on transcriptomic data.(Poster)
  CiRA/ISSCR 2016 INTERNATIONAL SYMPOSIUM,
  March, Kyoto.
  2016.3.22-24


• Junko Yamane, Kenta Kobayashi, Nobuko Taniyama, Tomoya Mori and Wataru Fujibuchi
  Developing enhanced-scRRBS method towards in-silico 3D reconstruction of mouse and human tissues.(Poster)
  CiRA/ISSCR 2016 INTERNATIONAL SYMPOSIUM,
  March, Kyoto.
  2016.3.22-24


• Kunie Sakurai, Andreas Kurtz, Glyn Stacy, Michel Sheldon, and Wataru Fujibuchi
  International collaboration for developing the standardized reporting guideline on cellular assays for regenerative medicine.(Poster)
  CiRA/ISSCR 2016 INTERNATIONAL SYMPOSIUM,
  March, Kyoto.
  2016.3.22-24


• Tomoya Mori, Kunie Sakurai and Wataru Fujibuchi
  A Cell Type Classification Method Based on Tissue Transcriptome Data and its Application to Germ Layers.(Poster)
  CiRA/ISSCR 2016 INTERNATIONAL SYMPOSIUM,
  March, Kyoto.
  2016.3.22-24


• Midori Yuji, Kunie Sakurai, Takeaki Taniguchi and Wataru Fujibuchi
  Developing an integrated database system for classifying human cells with a defined taxonomy and model animal cells.(Poster)
  CiRA/ISSCR 2016 INTERNATIONAL SYMPOSIUM,
  March, Kyoto.
  2016.3.22-24


• 桜井　都衣, 湯地　みどり, 谷口　丈晃, 藤渕　航
  ヒト細胞情報統合データベースSHOGoiNと細胞データの最小情報交換規格MIACARMの構築 (Poster)
  第15回日本再生医療学会総会,
  March, Osaka.
  2016.3.17-19


• 湯地　みどり, 桜井　都衣, 谷口　丈晃, 藤渕　航
  ヒト細胞の明確な分類およびモデル動物細胞との情報統合システムの構築
  第15回日本再生医療学会総会,
  March, Osaka.
  2016.3.17-19


• 谷山　暢子, 山根　順子, 小林　健太, 桜井　都衣, 山下　潤, 藤渕　航
  次世代シークエンサーを用いたマウス初期胚の全個体1細胞解析
  第15回日本再生医療学会総会,
  March, Osaka.
  2016.3.17-19


• Junko Yamane, Kenta Kobayashi, Nobuko Taniyama and Wataru Fujibuchi.
  Enhanced-scRRBS for Massive Single Cell Methylome Analysis Towards in silico 3D-Reconstructions of Mouse and Human Tissues.
  Pacifichem 2015,
  December, Hawaii.
  2015.12.15-20


• Kunie Sakurai and Wataru Fujibuchi
  Minimum Information Guideline for Regenerative Medicine and Genome Privacy.(Oral and Poster) RESEARCH AWARD
  IIBMP2015(JSBi2015),
  October, Kyoto.
  2015.10.29-31


• Kenta Kobayashi, Midori Yuji, Yuki Kato, Takeaki Taniguchi, Toru Maruyama, Michihiro Ito, Susumu Goto, Haruko Takeyama and Wataru Fujibuchi.
  Development of a pipeline for analysis of meta- and single-cell genomic sequences.(Poster)
  IIBMP2015(JSBi2015),
  October, Kyoto.
  2015.10.29-31


• Takamasa Okanishi, Yuki Kato, Hiroyuki Fujimura, Yoshikatsu Nakano, Shoichiro Suda, Hideko Sone and Wataru Fujibuchi.
  Network analysis of marine environmental factors based on MCMC sampling.(Poster)
  IIBMP2015(JSBi2015),
  October, Kyoto.
  2015.10.29-31


• Hideko Sone and Wataru Fujibuchi
  Toxicity prediction by using gene expression profiling data.
  The 43rd Symposium on Structural Activity Relationship 2015 ＆ The 10th Japan-China Joint Symposium on Drug Discovery and Development,
  September, Niigata.
  2015.9.27-29


• Nobuko Taniyama, Kenta Kobayashi, Junko Yamane, Jun Yamashita and Wataru Fujibuchi.
  Single cell transcriptome analysis of whole mouse blastocyst.
  The 86th Annual Meeting of the Zoological Society of Japan,
  September, Niigata.
  2015.9.17-19


• Kunie Sakurai and Wataru Fujibuchi
  Minimum Information Guideline for Regenerative Medicine and Genome Privacy.(Poster)
  PRIVAGEN 2015,
  September,Tokyo.
  2015.9.8


• 小林　健太, 加藤　有己, 谷口　丈晃, 丸山　徹, 伊藤　通浩, 五斗　進, 竹山　春子, 藤渕　航
  海洋環境解析に向けたメタゲノムおよび1細胞配列データ解析用パイプラインの開発
  第42回バイオ情報学研究会,
  June, Okinawa.
  2015.6.23-25


• 岡西　孝真, 加藤　有己, 藤村　弘行, 中野　義勝, 須田　彰一郎, 曽根　秀子, 藤渕　航
  MCMCサンプリングに基づく海洋環境因子ネットワーク解析
  第42回バイオ情報学研究会,
  June, Okinawa.
  2015.6.23-25


• Junko Yamane, Kenta Kobayashi, Yuki Kato and Wataru Fujibuchi.
  Towards in silico 3D-reconstruction of tissues based on massive single cell transcriptome and methylome techniques.(Poster)
  The 11th International Workshop on Advanced Genomics,
  May, Tokyo.
  2015.5.20-22


• Junko Yamane, Sachiyo Aburatani, Satoshi Imanishi, Hiromi Akanuma, Reiko Nagano, Tsuyoshi Kato, Hideko Sone, Seiichiroh Ohsako and Wataru Fujibuchi.
  Prediction of Developmental Chemical Toxicity by Support Vector Machines with Gene Networks in Human Embryonic Stem Cell Validation System.(Poster)
  The 18th Takeda Science Foundation Symposium on Biocience,
  January, Osaka.
  2015.1.15-17


• Kunie Sakurai, Junko Yamane, Kenta Kobayashi, Koji Yamanegi, Takeaki Taniguchi, Yuki Kato and Wataru Fujibuchi.
  SHOGoiN Cell Database: a framework for a new repository on single cell assay data and diverse knowledge of human cells.(Poster)
  The 18th Takeda Science Foundation Symposium on Biocience,
  January, Osaka.
  2015.1.15-17


• Junko Yamane, Toru Maruyama, Michihiro Ito, Haruko Takeyama and Wataru Fujibuchi.
  Kernel CCA for Microbial Meta-transcriptome Data to Investigate Coral Survivability in Ryukyu Sea.(Poster)
  GIW/ISCB-Asia 2014,
  December, Tokyo.
  2014.12.15-17


• Kunie Sakurai, Junko Yamane, Kenta Kobayashi, Koji Yamanegi, Takeaki Taniguchi, Yuki Kato and Wataru Fujibuchi.
  Stem Cell Informatics Database: a framework for a new repository on single cell assay data and diverse knowledge of human cells.(Poster)
  GIW/ISCB-Asia 2014,
  December, Tokyo.
  2014.12.15-17


• Takeaki Taniguchi, Yuki Kato, Susumu Goto and Wataru Fujibuchi.
  Development of a pipeline for analysis of meta- and single cell genomic sequences.(Poster)
  GIW/ISCB-Asia 2014,
  December, Tokyo.
  2014.12.15-17


• Junko Yamane, Toru Maruyama, Kenta Kobayashi and Wataru Fujibuchi.
  Standardization of Pluripotent Stem Cells and Differentiated Cells using Single-cell Analysis.(Poster)
  The 12th Annual Meeting of International Society for Stem Cell research,,
  June, Vancouver.
  2014.06.18-21


• Wataru Fujibuchi.
  SHOGoiN- Human omics database for the generation of iPS and normal cells.(Poster)
  Systems Biology: Global Regulation of Gene Expression,
  Cold Spring Harbor Laboratory, March, New York.
  2014.03.18-22


• Junko Yamane, Michihiro Tanaka and Wataru Fujibuchi.
  Standardization of human iPS and ES cells using single-cell transcriptome analysis.(Poster)
  Systems Biology: Global Regulation of Gene Expression,
  Cold Spring Harbor Laboratory, March, New York.
  2014.03.18-22


• Michihiro Tanaka, Junko Yamane, Kenichi Tanaka, Kenta Kobayashi and Wataru Fujibuchi.
  Bioinformatics resources for cell standardization at single-cell resolution.(Poster)
  The 7th Takeda Science Foundation Symposium on PharmaSciences,
  Center for Learning and Innovation (CLI) Takeda Pharmaceutical Company Ltd., January, Osaka.
  2014.01.15-18


• Junko Yamane, Sachiyo Aburatani, Satoshi Imanishi, Reiko Nagano, Hideko Sone, Seiichiroh Ohsako and Wataru Fujibuchi.
  Prediction of Developmental Neurotixic Effects using Human Pluripotent Stem Cells.(Poster)
  The 7th Takeda Science Foundation Symposium on PharmaSciences,
  Center for Learning and Innovation (CLI) Takeda Pharmaceutical Company Ltd., January, Osaka.
  2014.01.15-18


• Junko Yamane, Michihiro Tanaka and Wataru Fujibuchi.
  Single-cell RNA-seq analysis of human iPS and ES cells.(Poster)
  Bioinformatics week in Odaiba 2013 (BiWO 2013),
  AIST, September, Tokyo.
  2013.9.9-13


• Michihiro Tanaka, Junko Yamane and Wataru Fujibuchi.
  TRANSCRIPTOMIC LANDSCAPE OF HUMAN iPS CELLS AT SINGLE-CELL RESOLUTION.(Poster)
  CiRA International Symposium 2013, Raising the Next Generation of Stem Cell Research,
  Kyoto University Clock Tower Hall, March, Kyoto.
  2013.3.11-12


• Junko Yamane, Michihiro Tanaka and Wataru Fujibuchi.
  Standardization of human iPS cells with single cell technology.(Poster)
  International Joint Symposium on Single-Cell Analysis,
  Kyoto Research Park, November, Kyoto.
  2012.11.27-28