SHOGoiN Cell Transcriptome: Project ID SRP033209
| No. | Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Project Description | Project Submission Date | Organization Name | Stable Contact Information | Reference Submission Status | Reference Authors | Reference Title | Reference Pubmed Id | Assay Type | Assay Factor | Sample Id | SHOGoiN Cell Id | Source Cell Type | Source Organism | Race Or Strain | Age Or Stage | Source Tissue Or Organ | Source Cell Karyotype | Cell Lineage | Organism Genetic Information | Health Status | Source Provider | Assay Technology | Assay Detection Instrumentation | Assay Detection Instrument Vendor | Assessed Material | Source Cell Format | Source Cell Preparation Method | Source Cell Identidication Method | Source Cell Treatment | Data Id | Data Type | Data Processing Method | Data Processing Software And Version | Data Normalization Method | Data Normalization Software Name And Version | Data Analytical Software And Version | Reference Sequence Source | Genome Annotation Ref | ||||||
| 1 |  GSM1271862 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T1 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271862 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033853 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 2 |  GSM1271863 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T2 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271863 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033854 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 3 |  GSM1271864 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T3 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271864 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033855 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 4 |  GSM1271865 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T4 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271865 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033856 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 5 |  GSM1271866 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T5 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271866 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033857 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 6 |  GSM1271867 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T6 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271867 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033858 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 7 |  GSM1271868 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T7 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271868 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033859 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 8 |  GSM1271869 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T8 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271869 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033860 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 9 |  GSM1271870 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T9 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271870 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033861 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 10 |  GSM1271871 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T10 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271871 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033862 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 11 |  GSM1271872 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T11 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271872 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033863 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 12 |  GSM1271873 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T12 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271873 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033864 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 13 |  GSM1271874 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T13 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271874 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033865 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 14 |  GSM1271875 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T14 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271875 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033866 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 15 |  GSM1271876 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T15 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271876 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033867 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 16 |  GSM1271877 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T16 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271877 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033868 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 17 |  GSM1271878 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T17 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271878 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033869 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 18 |  GSM1271879 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T18 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271879 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033870 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 19 |  GSM1271880 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T19 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271880 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033871 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 20 |  GSM1271881 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T20 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271881 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033872 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 21 |  GSM1271884 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T23 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271884 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033875 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 22 |  GSM1271885 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T24 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271885 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033876 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 23 |  GSM1271886 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T25 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271886 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033877 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 24 |  GSM1271887 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T26 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271887 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033878 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 25 |  GSM1271888 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T27 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271888 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033879 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 26 |  GSM1271889 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T28 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271889 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033880 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 27 |  GSM1271890 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T29 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271890 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033881 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 28 |  GSM1271891 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T30 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271891 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033882 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 29 |  GSM1271892 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T31 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271892 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033883 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 30 |  GSM1271893 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T32 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271893 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033884 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 31 |  GSM1271894 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T33 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271894 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033885 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 32 |  GSM1271895 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T34 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271895 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033886 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 33 |  GSM1271896 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T35 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271896 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033887 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 34 |  GSM1271897 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T36 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271897 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033888 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 35 |  GSM1271898 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T37 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271898 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033889 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 36 |  GSM1271899 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T38 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271899 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033890 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 37 |  GSM1271900 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T39 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271900 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033891 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 38 |  GSM1271901 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T40 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271901 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033892 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 39 |  GSM1271902 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T41 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271902 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033893 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 40 |  GSM1271903 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T42 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271903 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033894 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 41 |  GSM1271904 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T43 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271904 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033895 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 42 |  GSM1271905 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T44 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271905 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033896 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 43 |  GSM1271906 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T45 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271906 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033897 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 44 |  GSM1271907 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T46 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271907 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033898 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 45 |  GSM1271908 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T47 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271908 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033899 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 46 |  GSM1271909 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T48 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271909 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033900 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 47 |  GSM1271910 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T49 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271910 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033901 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 48 |  GSM1271911 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T50 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271911 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033902 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 49 |  GSM1271912 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T51 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271912 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033903 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 50 |  GSM1271913 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T52 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271913 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033904 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 51 |  GSM1271914 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T53 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271914 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033905 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 52 |  GSM1271915 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T54 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271915 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033906 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 53 |  GSM1271916 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T55 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271916 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033907 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 54 |  GSM1271917 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T56 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271917 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033908 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 55 |  GSM1271918 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T57 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271918 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033909 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 56 |  GSM1271919 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T58 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271919 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033910 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 57 |  GSM1271920 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T59 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271920 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033911 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 58 |  GSM1271921 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T60 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271921 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033912 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 59 |  GSM1271922 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T61 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271922 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033913 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 60 |  GSM1271923 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T62 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271923 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033914 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 61 |  GSM1271924 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T63 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271924 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033915 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 62 |  GSM1271925 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T64 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271925 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033916 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 63 |  GSM1271926 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T65 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271926 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033917 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 64 |  GSM1271927 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T66 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271927 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033918 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 65 |  GSM1271928 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T67 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271928 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033919 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 66 |  GSM1271929 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T68 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271929 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033920 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 67 |  GSM1271930 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T69 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271930 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033921 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 68 |  GSM1271931 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T70 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271931 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033922 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 69 |  GSM1271932 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T71 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271932 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033923 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 70 |  GSM1271933 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T72 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271933 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033924 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 71 |  GSM1271934 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T73 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271934 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033925 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 72 |  GSM1271935 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T74 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271935 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033926 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 73 |  GSM1271936 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T75 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271936 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033927 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 74 |  GSM1271937 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T76 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271937 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033928 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 75 |  GSM1271938 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T77 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271938 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033929 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 76 |  GSM1271939 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T78 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271939 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033930 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 77 |  GSM1271940 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T79 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271940 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033931 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 78 |  GSM1271941 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T80 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271941 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033932 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 79 |  GSM1271942 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T81 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271942 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033933 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 80 |  GSM1271943 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T82 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271943 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E18.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033934 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 81 |  GSM1271945 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T84 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271945 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033936 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 82 |  GSM1271946 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T85 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271946 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033937 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 83 |  GSM1271947 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T86 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271947 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033938 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 84 |  GSM1271948 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T87 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271948 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033939 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 85 |  GSM1271949 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T88 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271949 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033940 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 86 |  GSM1271950 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T89 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271950 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033941 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 87 |  GSM1271951 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T90 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271951 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033942 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 88 |  GSM1271952 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T91 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271952 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033943 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 89 |  GSM1271953 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T92 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271953 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033944 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 90 |  GSM1271954 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T93 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271954 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033945 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 91 |  GSM1271955 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T94 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271955 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033946 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 92 |  GSM1271956 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T95 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271956 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033947 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 93 |  GSM1271957 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T96 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271957 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033948 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 94 |  GSM1271958 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T97 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271958 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033949 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 95 |  GSM1271959 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T98 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271959 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033950 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 96 |  GSM1271960 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T99 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271960 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033951 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 97 |  GSM1271961 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T100 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271961 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033952 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 98 |  GSM1271962 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T101 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271962 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033953 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 99 |  GSM1271963 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T102 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271963 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033954 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 100 |  GSM1271964 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T103 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271964 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033955 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 101 |  GSM1271965 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T104 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271965 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033956 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 102 |  GSM1271966 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T105 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271966 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033957 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 103 |  GSM1271967 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T106 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271967 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033958 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 104 |  GSM1271968 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T107 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271968 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033959 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 105 |  GSM1271969 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T108 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271969 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033960 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 106 |  GSM1271970 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T109 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271970 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033961 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 107 |  GSM1271971 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T110 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271971 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033962 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 108 |  GSM1271972 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T111 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271972 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033963 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 109 |  GSM1271973 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T112 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271973 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033964 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 110 |  GSM1271974 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T113 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271974 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033965 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 111 |  GSM1271975 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T114 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271975 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033966 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 112 |  GSM1271976 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T115 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271976 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033967 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 113 |  GSM1271977 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T116 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271977 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033968 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 114 |  GSM1271978 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T117 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271978 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033969 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 115 |  GSM1271979 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T118 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271979 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033970 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 116 |  GSM1271980 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T119 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271980 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033971 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 117 |  GSM1271981 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T120 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271981 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033972 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 118 |  GSM1271982 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T121 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271982 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033973 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 119 |  GSM1271983 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T122 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271983 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033974 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 120 |  GSM1271984 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T123 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271984 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033975 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 121 |  GSM1271985 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T124 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271985 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033976 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 122 |  GSM1271986 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T125 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271986 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033977 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 123 |  GSM1271987 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T126 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271987 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033978 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 124 |  GSM1271988 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T127 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271988 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033979 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 125 |  GSM1271989 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T128 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271989 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E14.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033980 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 126 |  GSM1271990 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T129 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271990 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033981 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 127 |  GSM1271991 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T130 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271991 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033982 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 128 |  GSM1271992 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T131 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271992 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033983 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 129 |  GSM1271993 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T132 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271993 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033984 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 130 |  GSM1271994 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T133 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271994 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033985 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 131 |  GSM1271995 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T134 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271995 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033986 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 132 |  GSM1271996 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T135 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271996 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033987 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 133 |  GSM1271997 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T136 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271997 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033988 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 134 |  GSM1271998 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T137 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271998 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033989 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 135 |  GSM1271999 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T138 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1271999 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033990 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 136 |  GSM1272000 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T139 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272000 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033991 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 137 |  GSM1272001 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T140 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272001 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033992 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 138 |  GSM1272002 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T141 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272002 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033993 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 139 |  GSM1272003 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T142 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272003 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033994 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 140 |  GSM1272004 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T143 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272004 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033995 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 141 |  GSM1272005 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T144 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272005 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033996 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 142 |  GSM1272006 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T145 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272006 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033997 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 143 |  GSM1272007 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T146 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272007 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033998 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 144 |  GSM1272008 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T147 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272008 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1033999 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 145 |  GSM1272009 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T148 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272009 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034000 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 146 |  GSM1272010 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T149 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272010 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034001 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 147 |  GSM1272011 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T150 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272011 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034002 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 148 |  GSM1272012 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T151 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272012 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034003 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 149 |  GSM1272013 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T152 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272013 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034004 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 150 |  GSM1272014 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T153 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272014 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034005 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 151 |  GSM1272015 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T154 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272015 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034006 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 152 |  GSM1272016 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T155 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272016 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034007 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 153 |  GSM1272017 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T156 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272017 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034008 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 154 |  GSM1272018 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T157 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272018 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034009 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 155 |  GSM1272019 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T158 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272019 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034010 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 156 |  GSM1272020 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T159 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272020 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034011 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 157 |  GSM1272021 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T160 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272021 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034012 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 158 |  GSM1272022 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T161 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272022 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034013 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 159 |  GSM1272023 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T162 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272023 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034014 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 160 |  GSM1272024 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T163 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272024 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034015 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 161 |  GSM1272025 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T164 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272025 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034016 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 162 |  GSM1272026 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T165 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272026 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034017 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 163 |  GSM1272027 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T166 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272027 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034018 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 164 |  GSM1272028 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T167 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272028 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034019 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 165 |  GSM1272029 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T168 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272029 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034020 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 166 |  GSM1272030 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T169 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272030 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034021 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 167 |  GSM1272031 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T170 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272031 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034022 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 168 |  GSM1272032 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T171 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272032 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034023 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 169 |  GSM1272033 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T172 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272033 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034024 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 170 |  GSM1272034 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T173 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272034 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034025 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 171 |  GSM1272035 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T174 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272035 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | P107 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | HiSeq 2000 | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034026 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 172 |  GSM1272036 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T175 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272036 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034027 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 173 |  GSM1272037 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T176 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272037 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034028 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 174 |  GSM1272038 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T177 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272038 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034029 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 175 |  GSM1272039 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T178 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272039 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034030 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 176 |  GSM1272040 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T179 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272040 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034031 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 177 |  GSM1272041 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T180 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272041 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034032 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 178 |  GSM1272042 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T181 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272042 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034033 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 179 |  GSM1272043 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T182 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272043 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034034 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 180 |  GSM1272044 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T183 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272044 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034035 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 181 |  GSM1272045 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T184 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272045 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034036 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 182 |  GSM1272046 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T185 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272046 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034037 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 183 |  GSM1272047 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T186 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272047 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034038 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 184 |  GSM1272048 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T187 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272048 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034039 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 185 |  GSM1272049 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T188 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272049 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034040 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 186 |  GSM1272050 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T189 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272050 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034041 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 187 |  GSM1272051 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T190 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272051 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034042 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 188 |  GSM1272052 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T191 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272052 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034043 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 189 |  GSM1272053 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T192 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272053 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034044 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 190 |  GSM1272054 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T193 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272054 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034045 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 191 |  GSM1272055 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T194 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272055 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034046 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 192 |  GSM1272056 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T195 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272056 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034047 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 193 |  GSM1272057 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T196 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272057 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034048 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 194 |  GSM1272058 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T197 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272058 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034049 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 195 |  GSM1272059 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T198 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272059 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034050 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 196 |  GSM1272060 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T199 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272060 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034051 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 197 |  GSM1272061 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T200 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272061 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034052 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||
| 198 |  GSM1272062 | 3080101000001000000000-254 | Sequence Read Archive | SRP033209 | SRP033209_T201 | High throughput quantitative whole transcriptome analysis of distal mouse lung epithelial cells from various developmental stages (E14.5, E16.5, E18.5 and adult) | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE52583 | 8-Apr-14 | Stanford University | Barbara Treutlein, btreutle@stanford.edu | Published | Treutlein B, Brownfield DG, Wu AR, Neff NF et al. | Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq. | 24739965 | Transcriptome | 3080101000001000000000-254 | GSM1272062 | 3080101000001000000000-254 | Type II pneumocyte (Distal lung epithelium) | Mouse | C57BL/6J | E16.5 | Lung | A knock-in allele into Sftpc encoding for a reverse tetracycline transactivator (SftpC-Cre-ERT2-rtTA) and heterozygous for an inserted transgene, which drives the expression of a GFP tagged human hist | Jackson Laboratory | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, sorted | EpCAM enrichment, CD45 depletion | SRR1034053 | Sequence | FPKM | CASAVA 1.8.2 | mm10 | |||||||||