SHOGoiN Cell Transcriptome: Project ID SRP061185
| No. | Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Project Description | Project Submission Date | Organization Name | Stable Contact Information | Reference Submission Status | Reference Authors | Reference Title | Reference Pubmed Id | Assay Type | Assay Factor | Sample Id | SHOGoiN Cell Id | Source Cell Type | Source Organism | Race Or Strain | Age Or Stage | Source Tissue Or Organ | Source Cell Karyotype | Cell Lineage | Organism Genetic Information | Health Status | Source Provider | Assay Technology | Assay Detection Instrumentation | Assay Detection Instrument Vendor | Assessed Material | Source Cell Format | Source Cell Preparation Method | Source Cell Identidication Method | Source Cell Treatment | Data Id | Data Type | Data Processing Method | Data Processing Software And Version | Data Normalization Method | Data Normalization Software Name And Version | Data Analytical Software And Version | Reference Sequence Source | Genome Annotation Ref | ||||||
| 1 |  GSM1822022 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T1 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822022 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103057 | Sequence | FPKM | mm10 | |||||||||||||
| 2 |  GSM1822023 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T2 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822023 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103058 | Sequence | FPKM | mm10 | |||||||||||||
| 3 |  GSM1822024 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T3 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822024 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103059 | Sequence | FPKM | mm10 | |||||||||||||
| 4 |  GSM1822025 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T4 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822025 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103060 | Sequence | FPKM | mm10 | |||||||||||||
| 5 |  GSM1822026 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T5 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822026 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103061 | Sequence | FPKM | mm10 | |||||||||||||
| 6 |  GSM1822027 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T6 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822027 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103062 | Sequence | FPKM | mm10 | |||||||||||||
| 7 |  GSM1822028 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T7 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822028 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103063 | Sequence | FPKM | mm10 | |||||||||||||
| 8 |  GSM1822029 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T8 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822029 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103064 | Sequence | FPKM | mm10 | |||||||||||||
| 9 |  GSM1822030 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T9 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822030 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103065 | Sequence | FPKM | mm10 | |||||||||||||
| 10 |  GSM1822031 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T10 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822031 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103066 | Sequence | FPKM | mm10 | |||||||||||||
| 11 |  GSM1822032 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T11 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822032 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103067 | Sequence | FPKM | mm10 | |||||||||||||
| 12 |  GSM1822033 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T12 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822033 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103068 | Sequence | FPKM | mm10 | |||||||||||||
| 13 |  GSM1822034 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T13 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822034 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103069 | Sequence | FPKM | mm10 | |||||||||||||
| 14 |  GSM1822035 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T14 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822035 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103070 | Sequence | FPKM | mm10 | |||||||||||||
| 15 |  GSM1822036 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T15 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822036 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103071 | Sequence | FPKM | mm10 | |||||||||||||
| 16 |  GSM1822037 | 6000001010000000000000-734 | Sequence Read Archive | SRP061185 | SRP061185_T16 | Single-cell RNA-seq of bone marrow-derived mesenchymal stem cells reveals unique profiles of lineage priming | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE70930 | 15-Jul-15 | University of Minnesota-Twin Cities | Brenda M Ogle, ogle@umn.edu | Published | Freeman BT, Jung JP, Ogle BM. | Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming. | 26352588 | Transcriptome | 6000001010000000000000-734 | GSM1822037 | 6000001010000000000000-734 | Mesenchymal stem cell (MSC) | Mouse | C57BL/6J, male | 3 mo | Bone marrow | RNA-Seq | MiSeq | Illumina | Total RNA | Single cell, cultured | SRR2103072 | Sequence | FPKM | mm10 | |||||||||||||