SHOGoiN Cell Transcriptome: Project ID SRP062177

No.	Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project									Assay		Source Cell												Technology								Data
No.	Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Project Description	Project Submission Date	Organization Name	Stable Contact Information	Reference Submission Status	Reference Authors	Reference Title	Reference Pubmed Id	Assay Type	Assay Factor	Sample Id	SHOGoiN Cell Id	Source Cell Type	Source Organism	Race Or Strain	Age Or Stage	Source Tissue Or Organ	Source Cell Karyotype	Cell Lineage	Organism Genetic Information	Health Status	Source Provider	Assay Technology	Assay Detection Instrumentation	Assay Detection Instrument Vendor	Assessed Material	Source Cell Format	Source Cell Preparation Method	Source Cell Identidication Method	Source Cell Treatment	Data Id	Data Type	Data Processing Method	Data Processing Software And Version	Data Normalization Method	Data Normalization Software Name And Version	Data Analytical Software And Version	Reference Sequence Source	Genome Annotation Ref
1	GSM1846949	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T1	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846949	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149785	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
2	GSM1846950	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T2	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846950	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149786	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
3	GSM1846951	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T3	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846951	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149787	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
4	GSM1846952	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T4	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846952	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149788	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
5	GSM1846953	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T5	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846953	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149789	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
6	GSM1846954	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T6	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846954	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149790	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
7	GSM1846955	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T7	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846955	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149791	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
8	GSM1846956	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T8	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846956	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149792	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
9	GSM1846957	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T9	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846957	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149793	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
10	GSM1846958	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T10	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846958	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149794	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
11	GSM1846959	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T11	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846959	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149795	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
12	GSM1846960	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T12	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846960	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149796	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
13	GSM1846961	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T13	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846961	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149797	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
14	GSM1846962	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T14	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846962	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149798	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
15	GSM1846963	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T15	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846963	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149799	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
16	GSM1846964	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T16	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846964	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149800	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
17	GSM1846965	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T17	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846965	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149801	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
18	GSM1846966	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T18	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846966	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149802	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
19	GSM1846967	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T19	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846967	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149803	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
20	GSM1846968	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T20	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846968	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149804	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
21	GSM1846969	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T21	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846969	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149805	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
22	GSM1846970	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T22	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846970	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149806	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
23	GSM1846971	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T23	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846971	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149807	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
24	GSM1846972	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T24	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846972	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149808	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
25	GSM1846973	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T25	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846973	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149809	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
26	GSM1846974	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T26	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846974	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149810	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
27	GSM1846975	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T27	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846975	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149811	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
28	GSM1846976	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T28	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846976	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149812	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
29	GSM1846977	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T29	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846977	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149813	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
30	GSM1846978	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T30	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846978	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149814	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
31	GSM1846979	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T31	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846979	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149815	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
32	GSM1846980	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T32	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846980	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149816	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
33	GSM1846981	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T33	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846981	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149817	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
34	GSM1846982	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T34	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846982	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149818	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
35	GSM1846983	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T35	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846983	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149819	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
36	GSM1846984	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T36	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846984	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149820	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
37	GSM1846985	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T37	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846985	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Fixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149821	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
38	GSM1846986	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T38	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846986	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149822	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
39	GSM1846987	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T39	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846987	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149823	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
40	GSM1846988	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T40	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846988	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149824	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
41	GSM1846989	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T41	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846989	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149825	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
42	GSM1846990	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T42	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846990	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)	SRR2149826	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
43	GSM1846991	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T43	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846991	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149827	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
44	GSM1846992	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T44	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846992	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149828	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19
45	GSM1846993	7020001000000000000000-715	Sequence Read Archive	SRP062177	SRP062177_T45	Fixed single-cell transcriptomic characterization of human radial glial diversity	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71858	7-Aug-15	Allen Institute for Brain Science	Zizhen Yao, zizheny@alleninstitute.org	Published	Thomsen ER, Mich JK, Yao Z, Hodge RD et al.	Fixed single-cell transcriptomic characterization of human radial glial diversity.	26524239	Transcriptome	7020001000000000000000-715	GSM1846993	7020001000000000000000-715	Embryonic stem cell (Inner cell mass)	Human	H1		Early embryonic tissue					WiCell, Madison WI	RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell, cultured		Live_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)	SRR2149829	Sequence		Bowtie, RSEM	TPM (transcripts per milllion reads), principal-component and clustering analysis			hg19