SHOGoiN Cell Transcriptome: Project ID SRP067892

No.	Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project									Assay		Source Cell												Technology								Data
No.	Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Project Description	Project Submission Date	Organization Name	Stable Contact Information	Reference Submission Status	Reference Authors	Reference Title	Reference Pubmed Id	Assay Type	Assay Factor	Sample Id	SHOGoiN Cell Id	Source Cell Type	Source Organism	Race Or Strain	Age Or Stage	Source Tissue Or Organ	Source Cell Karyotype	Cell Lineage	Organism Genetic Information	Health Status	Source Provider	Assay Technology	Assay Detection Instrumentation	Assay Detection Instrument Vendor	Assessed Material	Source Cell Format	Source Cell Preparation Method	Source Cell Identidication Method	Source Cell Treatment	Data Id	Data Type	Data Processing Method	Data Processing Software And Version	Data Normalization Method	Data Normalization Software Name And Version	Data Analytical Software And Version	Reference Sequence Source	Genome Annotation Ref
1	GSM1987570	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T1	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987570	3120102010200000000000-082	Lgr5-positive intestinal cell (CBC cell)	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), 5 day traced		RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell			SRR3063721	Sequence						mm10
2	GSM1987571	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T2	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987571	3120102010200000000000-082	Lgr5-positive intestinal cell (CBC cell)	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), 5 day traced		RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell			SRR3063722	Sequence						mm10
3	GSM1987573	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T3	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987573	3120102010200000000000-082	Lgr5-positive intestinal cell (CBC cell)	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), 5 day traced		RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell			SRR3063723	Sequence						mm10
4	GSM1987574	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T4	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987574	3120102010200000000000-082	Lgr5-positive intestinal cell (CBC cell)	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), 5 day traced		RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell			SRR3063724	Sequence						mm10
5	GSM1987575	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T5	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987575	3120102010200000000000-082	Lgr5-positive intestinal cell (CBC cell)	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), 5 day traced		RNA-Seq	HiSeq 2500	Illumina	Total RNA		Single cell			SRR3063725	Sequence						mm10
6	GSM1987576	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T6	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987576	3120102010200000000000-082	Lgr5-positive intestinal cell (CBC cell), CD24+ fraction	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), 3 week traced		RNA-Seq	NextSeq 500	Illumina	Total RNA		Single cell			SRR3063726	Sequence						mm10
7	GSM1987577	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T7	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987577	3120102010200000000000-082	3 week CD24+ cell	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), non-traced		RNA-Seq	NextSeq 500	Illumina	Total RNA		Single cell			SRR3063727	Sequence						mm10
8	GSM1987578	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T8	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987578	3120102010200000000000-082	Lgr5-positive intestinal cell (CBC cell), CD24+ fraction	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), 8 week traced		RNA-Seq	NextSeq 500	Illumina	Total RNA		Single cell			SRR3063728	Sequence						mm10
9	GSM1987579	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T9	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987579	3120102010200000000000-082	Lgr5-positive intestinal cell (CBC cell)	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), 8 week traced		RNA-Seq	NextSeq 500	Illumina	Total RNA		Single cell			SRR3063729	Sequence						mm10
10	GSM1987581	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T10	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987581	3120102010200000000000-082	Lgr5-positive intestinal cell (CBC cell), CD24+ fraction	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), 8 week traced		RNA-Seq	NextSeq 500	Illumina	Total RNA		Single cell			SRR3063730	Sequence						mm10
11	GSM1987582	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T11	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987582	3120102010200000000000-082	Lgr5-positive intestinal cell (CBC cell), CD24+ fraction	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), 8 week traced		RNA-Seq	NextSeq 500	Illumina	Total RNA		Single cell			SRR3063731	Sequence						mm10
12	GSM1987583	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T12	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987583	3120102010200000000000-082	8 week CD24+ cell	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), non-traced		RNA-Seq	NextSeq 500	Illumina	Total RNA		Single cell			SRR3063732	Sequence						mm10
13	GSM1987584	3120102010200000000000-082	Sequence Read Archive	SRP067892	SRP067892_T13	Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineage	http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76408	29-Dec-15	Hubrecht Institute	Kay Wiebrands, k.wiebrands@hubrecht.eu	Published	Gr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.	De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.	27345837	Transcriptome	3120102010200000000000-082	GSM1987584	3120102010200000000000-082	8 week CD24+ cell	Mouse	Lgr5-CreERT2 C57BL6/J	3 mo	Small intestine				Tamoxifen injection (0.4mg), non-traced		RNA-Seq	NextSeq 500	Illumina	Total RNA		Single cell			SRR3063733	Sequence						mm10